EBI Dbfetch

ID   CAD55365; SV 1; linear; genomic DNA; STD; PRO; 1929 BP.
XX
PA   AL939126.1
XX
DE   Streptomyces coelicolor probable 1-deoxyxylulose-5-phosphate synthase
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1929
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             AL939126.1:10826..12754
FT                   /transl_table=11
FT                   /gene="SCO6013"
FT                   /gene_synonym="SC1C3.01"
FT                   /gene_synonym="SC7B7.10"
FT                   /product="probable 1-deoxyxylulose-5-phosphate synthase"
FT                   /note="SC1C3.01, probable 1-deoxyxylulose-5-phosphate
FT                   synthase, partial CDS, len: >341 aa; overlaps and extends
FT                   SC7B7.10. Similar to many members of the transketolase
FT                   family e.g. DXS_MYCTU probable 1-deoxyxylulose-5-phosphate
FT                   synthase (638 aa), fasta scores; opt: 1288 z-score: 1753.5
FT                   E(): 0, 59.1% identity in 323 aa overlap. Contains Pfam
FT                   match to entry transketolase PF00456, Transketolase, score
FT                   32.69"
FT                   /note="SC7B7.10, unknown, partial CDS, len: >352 aa,
FT                   similar to many members of the transketolase family eg.
FT                   TR:O07184 (EMBL:Z96072) MTCY05A6.03C hypothetical protein
FT                   from M. tuberculosis (638 aa), fasta scores; opt: 1365
FT                   z-score: 1798.3 E(): 0, 58.7% identity in 351 aa overlap.
FT                   Contains PS00801 Transketolase signature 1"
FT                   /db_xref="GOA:Q8CJP7"
FT                   /db_xref="InterPro:IPR005475"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8CJP7"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAD55365.1"
FT                   /translation="MPLLTRITGPRDLDRLSLEELTQLAEEIRTFLVDAVSKTGGHLGP
FT                   NLGVVELTLALHRVFESPKDKVLWDTGHQSYVHKLLTGRQDFSKLKMKGGLSGYPSQGE
FT                   SEHDVIENSHASTVLGWADGIAKANQVMERDDHVVAVIGDGALTGGMAWEALNNIAAAK
FT                   DRPLVIVVNDNERSYAPTIGGLANHLATLRTTDGYERFLARTKEVLERTPVVGRPLYDT
FT                   LHGAKKGLKDFIAPQGMFEDLGLKYVGPIDGHDLEALESALTRAKRFGGPVIVHCLTEK
FT                   GRGYQPALQDEADRFHAVGKIHPDTGLPISTSGADWTSVFGDEMLKLGKEREDVVAITA
FT                   AMLQPVGLDKFAKAFPDRVYDVGIAEQHGAVSAAGLAHGGVHPVFAVYATFLNRAFDQV
FT                   LMDVALHKCGVTFVLDRAGVTGTDGASHNGMWDMSILQVVPGLRLAAPRDADQVRAQLR
FT                   EAVVVDDAPTVVRFSKGAVGPAVPAVGRVGGMDVLRAPGTGTPDVLLVSVGALAPMCLE
FT                   VADLLNKQGISTTVVDPRWVKPVDEAMAPLAERHRVVVTVEDNSRVGGVGSAVAQALRD
FT                   AGVDVPLRDFGIPPRFLDHASRAEVLAEIGLTAPDIARQVTGLVARLDGRYDRAGAEVD
FT                   QVEAARD"
XX
SQ   Sequence 1929 BP; 287 A; 773 C; 615 G; 254 T; 0 other; 1568648091 CRC32;
     gtgccgctgc tgacccgcat cacgggaccg cgcgatctgg accggctcag cctggaagag        60
     ctgactcagc tggccgagga gatccgtacc ttcctcgtcg acgccgtgtc caagaccggc       120
     ggccacctcg gccccaacct cggcgtggtg gaactcaccc tcgccctgca ccgggtcttc       180
     gaatcgccga aggacaaggt gctctgggac acgggccacc agtcctacgt gcacaagctg       240
     ctcaccggcc gccaggactt ctcgaaactg aagatgaagg gcggcctgtc cggctacccc       300
     tcgcagggag agtccgagca cgacgtcatc gagaacagcc acgcctccac ggtgctcggc       360
     tgggccgacg gcatcgccaa ggccaaccag gtcatggagc gcgacgacca cgtcgtcgcc       420
     gtcatcggcg acggcgccct gaccggcggc atggcctggg aggcgctgaa caacatcgcc       480
     gccgccaagg accgccccct ggtcatcgtc gtcaacgaca acgagcgctc ctacgctccc       540
     accatcggcg gcctcgccaa ccacctggcg accctgcgca ccaccgacgg ctacgagcgc       600
     ttcctggccc gcaccaagga ggtcctggag cgcaccccgg tcgtcgggcg gcccctctac       660
     gacaccctgc acggcgccaa gaagggcctg aaggacttca tcgccccgca gggcatgttc       720
     gaggacctcg gcctcaagta cgtcggcccc atcgacggcc acgacctgga ggccctggag       780
     tccgccctca cccgggccaa gcgcttcggc ggcccggtca tcgtgcactg cctcaccgag       840
     aagggccgcg gctaccagcc cgccctccag gacgaggcgg accgcttcca cgccgtcggc       900
     aagatccacc ccgacaccgg cctgcccatc tccacctccg gcgccgactg gacgtccgtc       960
     ttcggcgacg agatgctcaa gctcggcaag gagcgcgagg acgtggtcgc catcacggcc      1020
     gccatgctcc agccggtcgg cctcgacaag ttcgccaagg ccttccccga ccgcgtctac      1080
     gacgtcggca tcgccgagca gcacggcgcg gtctccgcgg ccggcctcgc gcacggcggc      1140
     gtccacccgg tcttcgccgt gtacgccacc ttcctcaacc gcgccttcga ccaggtcctg      1200
     atggacgtgg ccctgcacaa gtgcggcgtc accttcgtgc tggaccgcgc cggcgtcacc      1260
     ggcaccgacg gcgcctccca caacggcatg tgggacatgt cgatcctcca ggtcgtcccc      1320
     ggcctcaggc tcgccgcccc gcgcgacgcc gaccaggtcc gcgcccagct gcgcgaggcc      1380
     gtcgtggtgg acgacgcgcc gaccgtggtc cgcttctcca agggcgccgt cggccccgcc      1440
     gtccccgccg tcggccgcgt cggcgggatg gacgtcctgc gcgcccccgg caccgggacc      1500
     cccgacgtcc tcctggtctc ggtcggcgcc ctcgcgccga tgtgcctgga ggtggccgac      1560
     ctgctgaaca agcagggcat ctccaccacc gtggtcgacc cgcgctgggt caagcccgtc      1620
     gacgaggcca tggccccgct cgccgagcgc caccgcgtgg tcgtcaccgt cgaggacaac      1680
     tcccgcgtcg gcggcgtcgg ctccgccgtc gcccaggccc tgcgcgacgc cggcgtcgac      1740
     gtaccgctgc gcgacttcgg catcccgccg cgcttcctcg accacgcctc ccgcgcggag      1800
     gtgctggccg agatcgggct caccgcgccc gacatcgcgc gccaggtcac cggactggtc      1860
     gccaggctgg acggccggta cgaccgggcc ggcgccgagg tggaccaggt ggaggccgcg      1920
     cgcgactga                                                              1929
//