EBI Dbfetch

ID   CAD36194; SV 1; linear; genomic DNA; STD; FUN; 1497 BP.
XX
PA   AJ489944.2
XX
DE   Aspergillus niger partial rhamnogalacturonan lyase A
XX
OS   Aspergillus niger
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Eurotiales; Trichocomaceae; mitosporic Trichocomaceae;
OC   Aspergillus.
OX   NCBI_TaxID=5061;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1497
FT                   /organism="Aspergillus niger"
FT                   /strain="CBS 120.49"
FT                   /mol_type="genomic DNA"
FT   CDS             join(AJ489944.2:1..253,AJ489944.2:301..402,
FT                   AJ489944.2:451..572,AJ489944.2:619..688,
FT                   AJ489944.2:735..810,AJ489944.2:857..908,
FT                   AJ489944.2:956..1167,AJ489944.2:1215..1436,
FT                   AJ489944.2:1495..1741,AJ489944.2:1799..>1939)
FT                   /gene="rglA"
FT                   /product="rhamnogalacturonan lyase A"
FT                   /function="involved in pectin degradation"
FT                   /db_xref="GOA:Q8NJK5"
FT                   /db_xref="InterPro:IPR016590"
FT                   /db_xref="UniProtKB/TrEMBL:Q8NJK5"
FT                   /protein_id="CAD36194.1"
FT                   /translation="MLSKTSLLSLLSLAAGVVNADFGITTSDSYVINANSPNSLVFTVD
FT                   RGSCDITSIVHYGTELQYSGKGSHIGSGLGTATVSATKSGDYIKVTCETDTLTQYMGVH
FT                   DGDRIIHMATYITEEPSIGELRFIARLNSDVLPNEEPFGDVSNTADGEPIEGSDVFLVD
FT                   GETRSKFYSSQRFIDDQRHCIAGDEHRVCMILNQYETSSGGPFHRDINSNNGGDYNSLY
FT                   WYMNSGHVQLESYRMGLHGPYSMYFSRSGTPSTDIDTSFFADLDIEGYVAESGRGTVSG
FT                   TASGADSSFDWVVHWYNDDAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYVVATSEVT
FT                   VSAGSSTSKDISGSVETGTTIFKIGDWDGQPTGFRNAENQLRMHPSDSRMSDWGPLTYT
FT                   VGSSSLTDFPMAIFKSVNSPVTIKFTATSDQTGAATLRIRTTLSFAGGRPQATINDYEG
FT                   SAPSAPTNLDSRGVTRGAYRGYGDVYDVSVPEGTIVEGENT"
XX
SQ   Sequence 1497 BP; 347 A; 436 C; 383 G; 331 T; 0 other; 861130467 CRC32;
     atgttgtcca aaacgtcgct tctgtcgctc ctctcgcttg cagctggggt cgtcaatgca        60
     gactttggca taacgaccag tgattcctat gtcataaacg ccaattctcc caactcgttg       120
     gtgtttaccg ttgaccgcgg aagttgcgat atcacttcta tcgtgcatta tggcacagag       180
     ctgcagtatt ccggcaaggg tagccatatc ggctccggtc ttggaactgc gacagtttct       240
     gctactaaga gcggcgacta catcaaggtg acctgtgaga cggacacatt gacccagtat       300
     atgggtgtcc atgatgggga ccgtatcatt catatggcaa cctacattac cgaggagcca       360
     tctatcggtg aattgcggtt tattgctcga ctcaactcag atgtactccc caacgaggag       420
     ccattcggcg atgtgtccaa cactgctgat ggggagccga ttgaaggatc tgacgtgttc       480
     ctcgtcgatg gcgagactcg cagcaagttc tactccagcc agcgtttcat tgacgatcag       540
     agacactgca ttgcgggcga tgagcaccgc gtctgtatga tactcaatca atacgagacc       600
     tcttccggtg gtccctttca cagggacatc aactccaaca acggaggtga ctacaactcc       660
     ctctactggt acatgaactc gggccatgtc caactcgagt cctaccgcat gggtctccac       720
     ggaccgtact cgatgtactt cagccgcagc ggcactccca gcaccgacat tgacacgtcc       780
     ttcttcgcgg acctcgacat cgagggctac gtagccgaat caggcagggg aaccgtatcc       840
     ggaaccgcgt caggcgctga ctcgagcttc gactgggtcg ttcactggta caacgatgac       900
     gcccaatact ggacatacac atcctcctcc ggcagcttca cctcccccgc catgaaacca       960
     ggaacataca ccatggtata ttatcaaggc gagtacgtcg tggccacaag cgaagtgacc      1020
     gtcagcgccg gctcgagcac aagcaaggac atttccggct ccgtcgaaac aggaacgacc      1080
     attttcaaga ttggcgattg ggacggacaa ccaaccggct tccgcaatgc agaaaaccag      1140
     ctccgcatgc acccctccga ctcccgaatg tccgactggg gccctctaac ctacaccgtt      1200
     ggcagctcct ccctgactga tttccccatg gccattttca agagcgtcaa cagtccagta      1260
     accatcaagt tcactgcaac atctgaccag actggtgcag cgacgctgcg tatcagaact      1320
     acgctgtcgt tcgcgggtgg acggcctcaa gctacgatca acgactacga aggatccgcg      1380
     ccgtccgcac ctacgaattt ggactctcgt ggcgttactc gtggtgcgta tagagggtat      1440
     ggggatgttt acgatgtttc ggttcctgag gggacgattg tggaggggga gaacacg         1497
//