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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAD16482; SV 1; linear; genomic DNA; STD; PRO; 1143 BP.
XX
PA   AL646052.1
XX
DE   Ralstonia solanacearum GMI1000 probable harpin protein with pectate lyase
DE   domain
XX
OS   Ralstonia solanacearum GMI1000
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Ralstonia.
OX   NCBI_TaxID=267608;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1143
FT                   /organism="Ralstonia solanacearum GMI1000"
FT                   /strain="GMI1000"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL646052.1:2985681..2986823)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="popW"
FT                   /locus_tag="RSc2775"
FT                   /old_locus_tag="RS00072"
FT                   /product="probable harpin protein with pectate lyase
FT                   domain"
FT                   /function="miscellaneous; virulence"
FT                   /db_xref="GOA:Q8XVQ5"
FT                   /db_xref="HSSP:1EE6"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/TrEMBL:Q8XVQ5"
FT                   /inference="ab initio prediction:FrameD"
FT                   /protein_id="CAD16482.1"
FT                   /translation="MSIQIDRPNNHFQTPSTWNHDAGSSIDTSQLQRAVQLLDQVLQQL
FT                   EARKLFGNMLNQPGADNAGQNHAGGHGGGHHGGSNGFGENGRFGSPHANSPAQPDLELP
FT                   ANKPNNGKHNTSASTPDTQTAPSSTSPTTGTSPTPTSTSATEGKVAYGVKPPEPTGVVD
FT                   VSKPIVVKAGETFDGGGKYYRPTKEMGDGSQNEHQKPLFILEPGATLKNVQYSGGDGIH
FT                   LLGSAKLDRVVNRQVGEDAITIDGAKNRAHDAKIAGIDPASIPGGTPKVEITNSAFYGA
FT                   KDKLAQINGDVDLQVKGMYVNGAGKVFRTNGGDTQIKATVNVQDSNFQNVSEAVFRTDS
FT                   KFSTASFSDDVKSDAPFDGLAPDKSQVTGTNKVSYKAYSG"
XX
SQ   Sequence 1143 BP; 253 A; 377 C; 342 G; 171 T; 0 other; 997837853 CRC32;
     atgtccatcc agattgatcg cccgaacaac catttccaga cgccctcgac gtggaatcac        60
     gatgcgggtt ccagtatcga taccagccag ctccagcgcg cagtacaact gctcgaccag       120
     gtcttgcagc agctcgaagc gcgcaagctg ttcgggaaca tgctgaacca gccgggcgcc       180
     gacaacgccg gccagaacca cgctggcggc cacggcggcg gtcatcatgg cggctcgaac       240
     gggttcggtg aaaacggccg cttcggttcg ccgcacgcca attcgcctgc gcagccggac       300
     ctcgaactgc cggccaacaa gcccaacaac ggcaagcaca acacttcggc ttccacgccg       360
     gacacgcaga cggcgccgtc ttccacttcg cccacgaccg gcacgtcccc gacgcccacg       420
     tccacctccg cgaccgaggg caaggtggcc tacggcgtca agccgcccga gccgaccggc       480
     gtggtcgacg tcagcaagcc gatcgtcgtc aaggctggcg agacgttcga cggcggcggc       540
     aagtactacc gcccgaccaa ggagatgggc gacggttcgc agaacgagca ccagaagccg       600
     ctgttcattc tggagcccgg cgcgacgctc aagaacgtgc agtattccgg cggcgacggc       660
     atccacctgc tgggcagtgc caagctggac cgcgtcgtga accgccaagt gggcgaagat       720
     gccatcacca tcgatggcgc caagaaccgc gcgcatgatg ccaagatcgc cgggatcgat       780
     ccggcgtcga tccccggagg aacgcccaaa gtggagatca ccaacagcgc cttctatggc       840
     gccaaggaca agctcgctca gatcaacggc gacgttgacc tgcaggtgaa aggcatgtat       900
     gtcaacggcg ctggcaaggt cttccgtacc aacggtggtg atacgcagat caaggcgacg       960
     gtcaacgtcc aggattcgaa tttccagaac gtgtcggagg cggttttccg gaccgattcc      1020
     aagttctcga ctgcgtcgtt ctcggacgat gtgaaatcgg atgcgccctt cgatggactg      1080
     gctcccgaca agagccaagt cacaggcacc aacaaggtga gctacaaggc ctactcgggc      1140
     tga                                                                    1143
//
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