spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAD08825; SV 1; linear; genomic DNA; STD; PRO; 1452 BP.
XX
PA   AL627266.1
XX
DE   Salmonella enterica subsp. enterica serovar Typhi PrpD protein
XX
OS   Salmonella enterica subsp. enterica serovar Typhi
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Salmonella.
OX   NCBI_TaxID=90370;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1452
FT                   /organism="Salmonella enterica subsp. enterica serovar
FT                   Typhi"
FT                   /strain="CT18"
FT                   /mol_type="genomic DNA"
FT   CDS             AL627266.1:160771..162222
FT                   /transl_table=11
FT                   /gene="prpD"
FT                   /gene_synonym="STY0402"
FT                   /product="PrpD protein"
FT                   /note="Similar to Salmonella typhimurium prpd protein. prpd
FT                   protein SW:PRPD_SALTY () (483 aa) fasta scores: E(): 0,
FT                   98.1% id in 483 aa, and to Escherichia coli PrpD protein
FT                   prpD SW:PRPD_ECOLI (P77243) (483 aa) fasta scores: E(): 0,
FT                   93.8% id in 483 aa"
FT                   /note="Orthologue of E. coli PRPD_ECOLI; Fasta hit to
FT                   PRPD_ECOLI (483 aa), 94% identity in 483 aa overlap"
FT                   /db_xref="GOA:Q8Z903"
FT                   /db_xref="InterPro:IPR005656"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z903"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAD08825.1"
FT                   /translation="MSAHISNVRPDFDREIVDIVDYVMNYEITSKVAYDTAHYCLLDTL
FT                   GCGLEALEYPACKKLLGPIVPGTVVPNGARVPGTQFQLDPVQAAFNISAMIRWLDFNDT
FT                   WLAAEWGHPSDNLGGILATADWLSRNAVAAGKAPLTMKQVLSGMIKAHEIQGCIALENA
FT                   FNRVGLDHVLLVKVASTAVVAEMLGLTRDEILNAVSLAWVDGQSLRTYRHAPNTGTRKS
FT                   WAAGDATSRAVRLALMAKTGEMGYPSALTAKTWGFYDVSFKGETFRFQRPYGSYVMENV
FT                   LFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRTHEACLRIIDKKGPLNN
FT                   PADRDHCIQYMVAVPLLFGRLTAADYEDEVAQDKRIDALREKIVCYEDPAFTADYHDPE
FT                   KRAIGNAITVEFTDGSRFGEVVVEYPIGHARRRADGIPKLIEKFKINLARQFLTRQQQR
FT                   ILDVSLDRARLEQMPVNEYLDLYII"
XX
SQ   Sequence 1452 BP; 316 A; 406 C; 417 G; 313 T; 0 other; 1842543730 CRC32;
     atgtccgcac atatttcgaa cgttcgccca gactttgacc gtgaaatcgt tgatatcgtt        60
     gattacgtta tgaattacga gatcacctca aaggtggcgt acgacactgc gcattactgc       120
     ctgctcgaca cgctcggctg tggtctggaa gcgctggaat acccggcctg taaaaaattg       180
     cttgggccaa tcgtgccagg cacggtggtg cccaacggcg cacgcgtgcc gggcacccag       240
     ttccagctcg atccggtaca ggcagccttt aacattagcg cgatgatccg ctggctcgat       300
     tttaacgata cctggcttgc cgccgagtgg ggccatcctt ctgataacct cggcggtatt       360
     ctggcgacgg ctgactggct gtcacgcaac gccgtcgccg ccggcaaagc gccgctgacc       420
     atgaaacagg tattgagcgg gatgatcaaa gcccatgaaa ttcagggctg catcgcgctg       480
     gaaaacgcct tcaaccgtgt cgggcttgac catgtgctgc tggtcaaagt ggcctcgacc       540
     gcggtggtcg ctgaaatgct ggggctgacg cgcgatgaga tcctcaacgc ggtatcgctg       600
     gcgtgggtgg atgggcagtc gttgcgcact tatcgtcatg cgccgaatac cggtacgcgc       660
     aaatcctggg cggcgggcga tgcgacttcg cgcgcggtac gtctggcgct gatggcgaaa       720
     accggcgaga tgggctatcc ctcggcgctc accgccaaaa cctggggctt ctacgacgtt       780
     tcattcaaag gtgaaacgtt ccgtttccag cgcccttacg gctcctacgt gatggaaaac       840
     gtgctattta aaatttcttt cccggcagaa ttccactcgc aaaccgccgt cgaagcggcg       900
     atgacactgt atgagcagat gcaggccgcg ggcaaaacgg cagcggatat cgagaaagtg       960
     actatccgca cccacgaagc ctgtcttcgc attatcgata aaaaaggccc gctcaataac      1020
     ccggcggacc gcgatcactg tatccagtat atggtcgccg tgccgttgct gttcggacgg      1080
     ttaaccgcgg cggattatga agacgaggtg gcgcaggaca agcgtattga cgccctgcgc      1140
     gagaaaatcg tgtgctatga ggacccggct tttaccgccg actatcacga cccggaaaaa      1200
     cgtgctatcg gcaatgcgat caccgtggag tttactgatg gctcacgctt tggcgaggtt      1260
     gtcgtggagt atccgattgg tcatgcgcgt cgccgcgccg acggtattcc gaagcttatc      1320
     gaaaaattta aaattaacct ggcgcgtcag ttcctgactc gccagcagca acgcattctg      1380
     gatgtctccc tggacagagc ccgcctggag cagatgccgg ttaacgaata cctcgattta      1440
     tatatcatct ga                                                          1452
//
spacer
spacer