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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAD07982; SV 1; linear; genomic DNA; STD; PRO; 975 BP.
XX
PA   AL627281.1
XX
DE   Salmonella enterica subsp. enterica serovar Typhi putative 2-hydroxyacid
DE   dehydrogenase
XX
OS   Salmonella enterica subsp. enterica serovar Typhi
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Salmonella.
OX   NCBI_TaxID=90370;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..975
FT                   /organism="Salmonella enterica subsp. enterica serovar
FT                   Typhi"
FT                   /strain="CT18"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL627281.1:41615..42589)
FT                   /transl_table=11
FT                   /gene="STY4156"
FT                   /gene_synonym="yiaE"
FT                   /product="putative 2-hydroxyacid dehydrogenase"
FT                   /note="Similar to e.g. Homo sapiens glyoxylate reductase
FT                   grhpR TR:Q9UBQ7 (EMBL:AF134895) (328 aa) fasta scores: E():
FT                   0, 39.9% id in 296 aa and Hyphomicrobium methylovorum
FT                   hydroxypyruvate reductase TR:Q59463 (EMBL:D31857) (322 aa)
FT                   fasta scores: E(): 2.6e-29, 34.0% id in 321 aa"
FT                   /note="Orthologue of E. coli yiaE (YIAE_ECOLI); Fasta hit
FT                   to YIAE_ECOLI (324 aa), 83% identity in 323 aa overlap"
FT                   /db_xref="GOA:Q8Z2A8"
FT                   /db_xref="HSSP:1GDH"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8Z2A8"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAD07982.1"
FT                   /translation="MKPSIILYKTLPDDLLHRLEAHFTVTQVPNLHPETVARHAQAFAS
FT                   AQGLLGTSETVNRALLEKMPALRAASTISVGYDNVEVDALTARKIVLMHTPAVLTETVA
FT                   DTVMALMLATARRVVDVAERVKAGEWTESIGPAWFGVDVHHKTLGIVGMGRIGMALAQR
FT                   AHFGFTMPVLYHARRRHQEAEDRFNARYCDLDTLLQEADFVCVILPLTAETRHLFGATQ
FT                   FARMKSSAIFINAGRGPVVDENALIAALQNGEIYAAGLDVFEQEPLSVDSPLLNMSNVV
FT                   AVPHIGSATHETRYNMMACAVDNLIDALQGKIEKNCVNPQAAG"
XX
SQ   Sequence 975 BP; 212 A; 260 C; 296 G; 207 T; 0 other; 2402492958 CRC32;
     atgaagccgt ccatcattct ctacaaaacc ctgcctgatg atttgctgca tcgcctggag        60
     gcgcatttta ccgtcaccca ggtaccgaac ctgcatccgg aaacggtcgc gcgacacgcg       120
     caggcatttg ccagcgcgca aggccttctg ggcaccagcg aaaccgttaa ccgcgcgctg       180
     ctggaaaaaa tgccggcgct acgcgcggcg tcgaccatct cggtgggata cgataatgtc       240
     gaggtggacg cccttactgc ccgcaaaata gtcctgatgc acacgcctgc cgttttgacg       300
     gaaaccgttg ccgatacggt gatggcgttg atgctggcca ctgcccgccg cgtggtggac       360
     gtcgcagaac gggttaaggc gggtgaatgg acagaaagca ttggcccggc atggtttggc       420
     gtcgatgtgc atcacaaaac actcggtatc gttgggatgg ggcgtatcgg gatggcgctg       480
     gcgcagcgag cgcactttgg gtttaccatg ccggttctct atcacgcccg tcggcggcat       540
     caggaggcgg aagaccggtt taacgcccgc tactgcgatc tggatacgtt gttgcaggag       600
     gccgattttg tctgcgtgat cctgccacta acggcagaaa cgcgacatct gtttggcgca       660
     acacagtttg ccagaatgaa atcgtccgcc atttttatta atgccggacg cggcccggtg       720
     gtcgatgaaa acgcgctgat tgccgcgctg caaaacggtg aaatatatgc ggcaggtctg       780
     gatgtctttg aacaggaacc gctatctgtg gattcgcccc tgctgaacat gtctaatgtc       840
     gtcgcggtgc cgcatattgg ctcggcaacg catgagacgc gctacaacat gatggcctgt       900
     gcggtggata atttgattga tgcgctgcag ggaaaaatag agaagaactg cgtcaatccg       960
     caagcggcgg gataa                                                        975
//
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