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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAC35807; SV 1; linear; genomic DNA; STD; INV; 1569 BP.
XX
PA   AL031254.1
XX
DE   Caenorhabditis elegans C. elegans protein F11E6.1b, partially confirmed by
DE   transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1569
FT                   /organism="Caenorhabditis elegans"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="4R79"
FT   CDS             join(Z81058.1:34673..34727,Z81058.1:35125..35334,
FT                   Z81058.1:35401..35684,Z81058.1:35734..35900,
FT                   Z81058.1:35949..36324,Z81058.1:36416..36663,
FT                   AL031254.1:273..501)
FT                   /locus_tag="F11E6.1b"
FT                   /standard_name="F11E6.1b"
FT                   /product="C. elegans protein F11E6.1b, partially confirmed
FT                   by transcript evidence"
FT                   /note="contains similarity to Pfam domain PF02055
FT                   O-Glycosyl hydrolase family 30 contains similarity to
FT                   Interpro domains IPR001139 (Glycoside hydrolase, family
FT                   30), IPR013781 (Glycoside hydrolase, subgroup, catalytic
FT                   core)"
FT                   /db_xref="GOA:Q9BH43"
FT                   /db_xref="HSSP:1OGS"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:Q9BH43"
FT                   /db_xref="WormBase:WBGene00008706"
FT                   /protein_id="CAC35807.1"
FT                   /translation="MSRWKVVILCLLSFMFEIGHASFQCNPKTYDGAFLNIVCVCNATF
FT                   CDEIEPIGEIAEGKAIVYRSSLDGDRLKRMSMKMKEKLRKNESVNVTITIDASERFQNI
FT                   FGFGGAFTDSAGDQFVSLSETLQNYIVDSYFGKNGLEYNIGRVPIASCDFSTHEYSYDD
FT                   VHDDFELKHFALPDEDLKLKIPFIKKAIEKTEGNIQLFASPWSAPGWMKVTGRMRGGGA
FT                   MRNDKRVYQAYADYFFKFFEAYSSHAITFWGLTIQNEPSTGADMAWRWQTMNYTAETMR
FT                   DFLKKYLGPKLKENKLTETLKVMVLDDGRGLLPGWADTIFNDPEATKYADGVAVHWYGN
FT                   LYSPAVLLDITQRHHPTKFIFGTEACAGYAIHHGPLMGDWFTAENYASDIISDLNHHFT
FT                   GWTDWNLCLDDMGGPTWVDNFVDSPIIVNRTGQEFYKQPMFYAMGHFSKFLPRGSTRVF
FT                   TKIEGNLAVSATSVVIEGGRRATVILSKASNSLLTRIVDSSTGFSIVLNLPPRSIHTVI
FT                   WKKRK"
XX
SQ   Sequence 1569 BP; 499 A; 258 C; 338 G; 474 T; 0 other; 3434676940 CRC32;
     atgtcaagat ggaaggtcgt tattttgtgc ctattaagtt ttatgtttga aatcggtcat        60
     gcttcttttc aatgcaaccc aaaaacctat gacggcgcgt ttctcaacat tgtttgtgtt       120
     tgcaacgcaa cgttttgcga tgaaattgag ccaataggag agatagctga agggaaggca       180
     attgtttata gatcaagttt ggacggcgat agattgaaac gcatgagtat gaaaatgaaa       240
     gagaaattga gaaaaaatga atcagttaat gtgacaatta caatagatgc cagtgaaaga       300
     tttcaaaata tttttggttt tggaggagca tttactgatt ctgccggcga tcaatttgtt       360
     tccttatcgg agacacttca aaattatatc gttgattcat attttggaaa aaatggatta       420
     gaatataata taggaagagt tccaatagcc agttgtgatt tttctactca tgaatatagc       480
     tatgatgacg ttcatgatga ttttgaatta aaacattttg cattacctga tgaagattta       540
     aaactaaaga ttccatttat caagaaagca attgaaaaaa ctgaaggaaa cattcaatta       600
     tttgccagtc catggtcagc tcctggatgg atgaaagtta ctggacgcat gaggggcgga       660
     ggagctatga gaaatgataa gcgtgtttat caagcgtacg ctgattattt ttttaaattt       720
     ttcgaagcct attcatctca tgcaattacc ttttggggac taacaattca aaatgagcca       780
     tcaacaggag ctgacatggc atggagatgg cagactatga attatacagc agaaacgatg       840
     cgagattttc taaaaaaata tcttggccca aaactgaaag aaaataaact aacggaaact       900
     ttgaaagtta tggttttgga tgatggaaga ggattactcc ctggatgggc tgacactatt       960
     ttcaatgacc cggaagcaac caaatatgca gatggtgtag cagttcactg gtatggtaac      1020
     ttgtattctc ctgctgttct tcttgatatt actcaaaggc atcatccaac caaatttatt      1080
     tttggaaccg aggcatgcgc gggttacgct attcatcatg gcccattaat gggtgactgg      1140
     tttacggcag aaaattatgc atctgatatt atcagtgact taaaccacca ctttactgga      1200
     tggaccgatt ggaacttatg tctggacgac atgggcggcc cgacttgggt tgataacttt      1260
     gttgattctc caattattgt aaatcgtaca gggcaagagt tctacaaaca accaatgttc      1320
     tatgcaatgg gacattttag taaattcctt ccacgtggat ctactcgtgt gttcacaaag      1380
     atcgagggaa acctggctgt ctcagctaca agtgttgtga ttgaaggtgg aagacgagct      1440
     acagttattt tatcaaaagc gtccaactca ttattgacac gtatagttga cagttcaaca      1500
     ggattctcta ttgtgctgaa tttgccccca agatccattc atacagtgat ttggaagaaa      1560
     agaaaataa                                                              1569
//
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