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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAC08338; SV 1; linear; genomic DNA; STD; PLN; 1233 BP.
XX
PA   AL392174.1
XX
DE   Arabidopsis thaliana (thale cress) alpha-galactosidase-like protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1233
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="5"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(AL392174.1:58669..58761,
FT                   AL392174.1:58867..59007,AL392174.1:59106..59155,
FT                   AL392174.1:59244..59334,AL392174.1:59422..59504,
FT                   AL392174.1:59612..59676,AL392174.1:59758..59841,
FT                   AL392174.1:59940..60005,AL392174.1:60086..60144,
FT                   AL392174.1:60233..60308,AL392174.1:60405..60508,
FT                   AL392174.1:60597..60631,AL392174.1:60794..60850,
FT                   AL392174.1:60951..61009,AL392174.1:61265..61434))
FT                   /gene="F8L15_110"
FT                   /product="alpha-galactosidase-like protein"
FT                   /note="strong similarity to alpha-galactosidase, coffee,
FT                   PIR:T50781"
FT                   /note="Contains Alpha-galactosidase signature
FT                   AA89-105;WW/rsp5/WWP domain signature and profile
FT                   AA235-260"
FT                   /note="contains EST gb:AV564036.1, AV519332.1, AV440307.1,
FT                   T03999.1, AV519377.1"
FT                   /db_xref="GOA:Q9FT97"
FT                   /db_xref="HSSP:1UAS"
FT                   /db_xref="InterPro:IPR001202"
FT                   /db_xref="UniProtKB/TrEMBL:Q9FT97"
FT                   /protein_id="CAC08338.1"
FT                   /translation="MSRRAMVIKMPILMILISSMVMTMVESSRSVNNGHDDSEILRRHL
FT                   LTNGLGVTPPMGWNSWNHFSCNIDEKMIKETADALVTTGLSKLGYNYVNIDDCWAEISR
FT                   DSKGSLVPKKSTFPSGIKAVADYVHSKGLKLGIYSDAGYFTCSKTMPGSLGYEEHDAKT
FT                   FAEWGIDYLKYDNCNSDGSKPTVRYPVMTRALMKSGRPIFHSLCEWGDMHPALWGSPVG
FT                   NSWRTTNDIKDTWLSMISIADMNEVYAEHARPGGWNDPDMLEVGNGGMTKDEYIVHFSI
FT                   WAISKAPLLLGCDIRNMTKETMEIVANKEVIAINQDPHGVQAKKVRMEGDLEVWAGPLS
FT                   GYRVALLLLNRGPSRTSITALWEDIEIPANSIVEARDLWEHQTLKQKFVGNLTATVDSH
FT                   ACKLYVLKPVA"
XX
SQ   Sequence 1233 BP; 359 A; 243 C; 308 G; 323 T; 0 other; 1364326728 CRC32;
     atgtcgagac gagcaatggt gataaagatg ccaatactta tgatactgat ttcatcaatg        60
     gtgatgacga tggtcgagtc ttcgagatca gttaataatg gtcatgacga ttctgagatc       120
     ttacgaagac acttgctcac taatggcctc ggagtcactc ctcccatggg gtggaatagc       180
     tggaaccatt ttagctgcaa catagatgaa aaaatgatca aagaaactgc tgatgctttg       240
     gttaccactg gcctctctaa gcttggctac aactatgtta acatcgatga ttgctgggct       300
     gaaatttctc gtgacagcaa gggaagtctg gtgccaaaga agtcaacttt cccttctgga       360
     attaaagcgg ttgcggatta tgttcacagt aaaggcctta agcttgggat ttactcagat       420
     gccgggtatt tcacttgcag taaaaccatg ccaggttctt taggctacga ggagcatgat       480
     gccaagacat ttgcagaatg gggaattgat tacttgaagt atgacaactg caacagcgat       540
     ggctctaaac ctactgtcag gtatccagtg atgactcgag ctctgatgaa atctggccgc       600
     cccatctttc actcattgtg tgaatgggga gatatgcatc cagctctatg gggatctcca       660
     gtaggcaaca gttggagaac cactaatgac attaaagata cttggcttag tatgatctca       720
     atagcagaca tgaatgaagt ctacgctgag catgcaagac ctggtggctg gaacgacccg       780
     gatatgcttg aagtgggaaa tggagggatg acaaaagacg agtacatagt ccatttcagc       840
     atatgggcaa tctcaaaggc tcctcttcta cttggttgtg acataagaaa catgaccaaa       900
     gaaacaatgg agattgtcgc caacaaggaa gtcattgcta ttaatcaaga tccacatggt       960
     gttcaggcca agaaagttag aatggaaggc gatctcgagg tttgggcagg accattgtca      1020
     ggttacagag tagctttgct tctattgaac cgtggaccat cgcgaacttc gattactgct      1080
     ctttgggagg atattgagat ccctgcaaat agcatcgttg aagccagaga tctatgggag      1140
     caccagacat tgaagcaaaa gtttgtgggg aacttgacag caacagtgga ttctcatgcg      1200
     tgtaagttgt atgttctcaa acctgttgcc tga                                   1233
//
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