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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAC07801; SV 1; linear; genomic DNA; STD; PRO; 1476 BP.
XX
PA   AJ272076.1
XX
DE   Alteromonas sp. ATCC 43554 iota-carrageenase, CgiA
XX
OS   Alteromonas sp. ATCC 43554
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Alteromonadaceae; Alteromonas.
OX   NCBI_TaxID=116059;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1476
FT                   /organism="Alteromonas sp. ATCC 43554"
FT                   /strain="1"
FT                   /strain="ATCC 43554"
FT                   /mol_type="genomic DNA"
FT                   /country="Canada:Quebec"
FT   CDS             AJ272076.1:211..1686
FT                   /transl_table=11
FT                   /gene="cgiA"
FT                   /product="iota-carrageenase, CgiA"
FT                   /function="hydrolyses the b-1,4 linkages in the
FT                   iota-carrageenan"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="PDB:1H80"
FT                   /db_xref="UniProtKB/TrEMBL:Q9F5I8"
FT                   /protein_id="CAC07801.1"
FT                   /translation="MRLYFRKLWLTNLFLGGALASSAAIGAVSPKTYKDADFYVAPTQQ
FT                   DVNYDLVDDFGANGNDTSDDSNALQRAINAISRKPNGGTLLIPNGTYHFLGIQMKSNVH
FT                   IRVESDVIIKPTWNGDGKNHRLFEVGVNNIVRNFSFQGLGNGFLVDFKDSRDKNLAVFK
FT                   LGDVRNYKISNFTIDDNKTIFASILVDVTERNGRLHWSRNGIIERIKQNNALFGYGLIQ
FT                   TYGADNILFRNLHSEGGIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPH
FT                   FMKNGDVQVTNVSSVSCGSAVRSDSGFVELFSPTDEVHTRQSWKQAVESKLGRGCAQTP
FT                   YARGNGGTRWAARVTQKDACLDKAKLEYGIEPGSFGTVKVFDVTARFGYNADLKQDQLD
FT                   YFSTSNPMCKRVCLPTKEQWSKQGQIYIGPSLAAVIDTTPETSKYDYDVKTFNVKRINF
FT                   PVNSHKTIDTNTESSRVCNYYGMSECSSSRWER"
XX
SQ   Sequence 1476 BP; 466 A; 265 C; 338 G; 407 T; 0 other; 303305793 CRC32;
     atgcgcttat attttagaaa gttgtggtta acaaatttat ttttaggcgg agcactggcc        60
     tcttcagctg cgataggggc tgtctccccc aagacttata aggacgcaga tttttatgtt       120
     gcccctactc aacaagatgt taactatgat ttagttgatg attttggcgc taatggaaac       180
     gacactagtg atgacagtaa tgctttacaa agagcaatta atgctattag tagaaaaccg       240
     aatgggggca ctttactaat accgaatgga acttaccatt tcctcggcat acagatgaag       300
     tcgaacgtac acatccgtgt tgagagtgac gtgataatca agccaacgtg gaatggggat       360
     ggcaaaaacc accgactatt tgaagttggc gtaaacaata ttgtaagaaa cttcagcttt       420
     caagggttag gaaacggttt tttggtggat tttaaagatt ctcgcgacaa aaacttagct       480
     gtttttaagt taggcgatgt tagaaattac aaaatttcca attttaccat tgatgataat       540
     aaaacgatat ttgcctcaat tttagtggac gtaacagaac gtaatgggcg gttacattgg       600
     tcgcgtaatg gaattatcga aagaataaaa caaaataacg ctttgttcgg ctacggcctt       660
     attcaaacct atggcgcaga taatattttg tttaggaacc tccattcgga aggcggaatt       720
     gcgttacgga tggaaactga caacttactt atgaaaaatt ataagcaagg cggaataaga       780
     aacatctttg ctgataatat cagatgtagc aaaggacttg cggcggtcat gtttggccca       840
     cattttatga agaatggaga tgtgcaagtg accaatgtca gctcagttag ttgcggttcg       900
     gctgtacgaa gtgatagtgg atttgtcgaa ctctttagcc cgacagacga agtacatacg       960
     cgtcaaagtt ggaaacaagc cgttgaaagt aaattgggcc gagggtgtgc gcaaacccct      1020
     tatgctagag gtaatggtgg tacacggtgg gcggctcgcg taacacaaaa agacgcgtgt      1080
     ttagataaag caaaactgga atatggaata gagcctggtt catttggcac ggttaaagtc      1140
     tttgatgtta cagcgcgttt tggttataac gcagatctta aacaggacca gctagactac      1200
     ttttctacat ccaaccctat gtgcaagcgt gtatgccttc ctacaaaaga acaatggagt      1260
     aagcaaggcc aaatttacat tggtccgtca ttagctgcag taattgatac cacacctgaa      1320
     acttcaaaat acgattatga tgtgaaaact tttaacgtca aaagaataaa ttttcctgta      1380
     aattcacaca agactatcga cacgaatact gaaagtagcc gtgtctgcaa ttattacggt      1440
     atgtccgaat gctccagcag tcgatgggag cgatag                                1476
//
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