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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAC05887; SV 1; linear; genomic DNA; STD; PRO; 1386 BP.
XX
PA   AL939122.1
XX
DE   Streptomyces coelicolor fumarate hydratase C
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1386
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL939122.1:110624..112009)
FT                   /transl_table=11
FT                   /gene="SCO5042"
FT                   /gene_synonym="fumC"
FT                   /gene_synonym="SCK7.15c"
FT                   /product="fumarate hydratase C"
FT                   /note="SCK7.15c, fumC, fumarate hydratase C, len: 461 aa;
FT                   similar to SW:FUMC_PSEAE (EMBL:U59458) Pseudomonas
FT                   aeruginosa fumarate hydratase C (EC 4.2.1.2) FumC, 458 aa;
FT                   fasta scores: opt: 1505 z-score: 1638.8 E(): 0; 53.6%
FT                   identity in 459 aa overlap. Contains Pfam match to entry
FT                   PF00206 lyase_1, Lyase and match to Prosite entry PS00163
FT                   Fumarate lyases signature"
FT                   /db_xref="GOA:Q9FBN6"
FT                   /db_xref="HSSP:1FUQ"
FT                   /db_xref="InterPro:IPR000362"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9FBN6"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAC05887.1"
FT                   /translation="MSEYRIEHDSMGEVRVPADAKWRAQTQRAVENFPVSGQRIERAHI
FT                   EALARIKSAAAKVNAELGVLDEDVAGAIQEAAGEVAEGKWDEHFPVDVFQTGSGTSSNM
FT                   NTNEVVATLATERLGRDVHPNDHVNASQSSNDVFPSSIHIAATAAVTRDLIPALDHLAG
FT                   ALERKAGEFADVVKSGRTHLMDATPVTLGQEFGGYAAQVRYGIERLQASLPRLAELPLG
FT                   GTAVGTGINTPPGFSAAVIEEVARATGLPLTEARDHFEAQGARDGIVETSGQLRTIGVG
FT                   LTKIANDLRWMASGPRTGLAEISLPDLQPGSSIMPGKVNPVIPEAVLMVAAQVTGNDAT
FT                   VAAAGAAGNFELNVMLPVIAKNVLESVRLLANVSRLLADRTVDGIVAHPERAREYAESS
FT                   PSVVTPLNKYLGYEEAAKVAKRALAERKTIRQTVLEGGYVERGDLTREQLDQALDVLRM
FT                   TRP"
XX
SQ   Sequence 1386 BP; 221 A; 512 C; 481 G; 172 T; 0 other; 1923075477 CRC32;
     atgagcgaat accgcatcga gcacgactcc atgggcgagg tccgcgtccc cgcggacgcc        60
     aagtggcgcg cccagaccca gcgcgccgtc gagaacttcc ccgtctccgg gcagcgcatc       120
     gagcgcgcgc acatcgaggc gctggcgcgg atcaagagcg cggcggcgaa ggtcaacgcc       180
     gagctgggag tgctcgacga ggacgtcgcc ggcgcgatcc aggaggcggc cggtgaggtg       240
     gccgagggga agtgggacga gcacttcccc gtcgacgtgt tccagaccgg gtccgggacc       300
     tcgtccaaca tgaacaccaa cgaggtcgtc gccaccctgg cgactgaacg gctcggccgc       360
     gacgtgcatc ccaacgacca cgtcaacgcc tcccagtcgt ccaacgacgt cttcccgtcc       420
     tcgatccaca tcgccgccac cgccgccgtc acccgcgacc tgatcccggc cctggaccat       480
     ctcgccggcg ccctggagcg caaggccggg gagttcgccg acgtggtgaa gtccgggcgt       540
     acgcacctca tggacgccac gcccgtcacc ctgggccagg agttcggcgg ttacgcggcc       600
     caggtgcggt acggcatcga gcggcttcag gcctcactgc cccggctcgc cgagctgccg       660
     ctgggcggca ccgcggtcgg caccggcatc aacaccccgc ccggcttctc cgccgccgtc       720
     atcgaggagg tggcccgcgc gacggggctg ccgctgaccg aggcgcgcga ccacttcgag       780
     gcgcagggcg cccgggacgg catcgtcgag accagcgggc agctgcggac catcggcgtc       840
     gggctcacga agatcgccaa cgacctgcgc tggatggcgt ccggtccgcg caccgggctc       900
     gcggagatct cgctgcccga cctccagccc gggtcgtcca tcatgcccgg caaggtcaac       960
     ccggtgatcc ccgaggcggt cctcatggtc gccgcccagg tcaccggcaa cgacgcgacg      1020
     gtcgccgcgg cgggcgcggc cggcaacttc gagctgaacg tgatgctgcc ggtcatcgcc      1080
     aagaacgtgc tggagtcggt gcggctgctc gccaacgtct cccggctgct cgccgaccgc      1140
     accgtggacg ggatcgtggc gcaccccgag cgggcccgcg agtacgccga gtcctcgccc      1200
     tccgtggtca cgccgctcaa caagtacctc gggtacgagg aggccgccaa ggtcgccaag      1260
     agggcgctgg ccgagcggaa gacgatccgg cagaccgtgc tggagggcgg ctacgtggaa      1320
     cgcggcgacc tcacgcggga gcaactggac caggccctgg acgtgctgcg gatgacccgc      1380
     ccgtga                                                                 1386
//
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