spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAC01493; SV 1; linear; genomic DNA; STD; PRO; 654 BP.
XX
PA   AL939108.1
XX
DE   Streptomyces coelicolor putative polypeptide deformylase
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..654
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL939108.1:80182..80835)
FT                   /transl_table=11
FT                   /gene="SCO1211"
FT                   /gene_synonym="2SCG58.11c"
FT                   /product="putative polypeptide deformylase"
FT                   /note="2SCG58.11c, probable polypeptide deformylase, len:
FT                   217 aa; similar to SW:DEF_STRCO (EMBL:AL078618)
FT                   Streptomyces coelicolor polypeptide deformylase (EC
FT                   3.5.1.31) Def or SC10A7.23, 208 aa; fasta scores: opt: 594
FT                   z-score: 712.9 E(): 3.1e-32; 54.2% identity in 166 aa
FT                   overlap and to SW:DEF_ECOLI (EMBL:X77800) Escherichia coli
FT                   polypeptide deformylase (EC 3.5.1.31) Def, 168 aa; fasta
FT                   scores: opt: 321 z-score: 391.3 E(): 2.5e-14; 34.2%
FT                   identity in 155 aa overlap. Contains Pfam match to entry
FT                   PF01327 Pep_deformylase, Polypeptide deformylase"
FT                   /db_xref="GOA:Q9FCA2"
FT                   /db_xref="HSSP:1LME"
FT                   /db_xref="InterPro:IPR000181"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9FCA2"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAC01493.1"
FT                   /translation="MWTSAYRDPFALPNRGTGHRFRRWAPAAGGHRDLTLTAMRQGSIP
FT                   GAHGRVRPLGLLGDPVLHARCAEVTDFGPELAALVEDLFATMYAAHGVGLAANQVGEAV
FT                   RVFVYDCPDDEDERHLGHVVNPRLVETGGVVVRGPEGCLSLPGLEAGTERYDEAVVTGF
FT                   TVAGEPVTVRGTGFFARCLQHECDHLEGRVYADRLTGRRHRKLMRQVARASWHR"
XX
SQ   Sequence 654 BP; 82 A; 225 C; 251 G; 96 T; 0 other; 408548078 CRC32;
     gtgtggacct cagcctatcg agatccattc gcactcccga atcgcggcac cggccaccgg        60
     ttccggcggt gggcgcctgc cgccggggga cacagggacc ttactctgac cgccatgcga       120
     caaggctcca tcccgggcgc ccacgggcgc gtccgtcccc tcggcctcct cggcgacccc       180
     gtcctgcacg cccgctgcgc ggaggtgacg gacttcggtc cggaactcgc ggcgctcgtg       240
     gaggacttgt tcgcgaccat gtacgccgcc cacggcgtgg gcctggccgc gaaccaggtc       300
     ggcgaggcgg tgcgcgtctt cgtgtacgac tgcccggacg acgaggacga gcggcacctc       360
     gggcacgtgg tgaacccccg gctggtggag accggcggtg tggtggtgcg cggtccggag       420
     ggctgtctgt cgctgccggg tctggaggcg gggaccgagc ggtacgacga ggcggtggtg       480
     acgggcttca cggtggcggg tgagccggtc accgtgcgcg ggacggggtt cttcgcccgg       540
     tgcctccagc acgagtgcga ccacctggag ggacgggtct acgccgatcg cctgaccggc       600
     cggcgccacc gcaagctgat gcgccaggtg gcgcgggcgt cctggcaccg ctga             654
//
spacer
spacer