 |
|
EBI DbfetchID CAB94651; SV 1; linear; genomic DNA; STD; PRO; 1665 BP. XX PA AL939130.1 XX DE Streptomyces coelicolor putative polysaccharide lyase XX OS Streptomyces coelicolor OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Streptomycineae; Streptomycetaceae; Streptomyces. OX NCBI_TaxID=1902; XX FH Key Location/Qualifiers FH FT source 1..1665 FT /organism="Streptomyces coelicolor" FT /strain="A3(2)" FT /mol_type="genomic DNA" FT CDS complement(AL939130.1:274417..276081) FT /transl_table=11 FT /gene="SCO7228" FT /gene_synonym="SC2H12.27c" FT /product="putative polysaccharide lyase" FT /note="SC2H12.27c, possible polysaccharide lyase, len: 554 FT aa. Similar to regions within several pectate lyases e.g. FT Erwinia chrysanthemi SW:PELX_ERWCH(EMBL:M62739) FT exopolygalacturonate lyase precursor (EC 4.2.2.9), PelX FT (749 aa), fasta scores opt: 441 z-score: 462.5 E(): 2.7e-18 FT 33.2% identity in 455 aa overlap." FT /db_xref="GOA:Q9K457" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/TrEMBL:Q9K457" FT /protein_id="CAB94651.1" FT /translation="MSDGKTRESAFSSRSSHRVLVGPNPPGDTMQVRPVIASVALLGGT FT LVALSGTSAQAAAARYEAETASAVCTGTIDSDWSGYSGSGFCNGTNAVGAYAQFTVSAP FT AAGTATLNVRFANGTDGARAANIMVNGSSVASASFETTGAWDTWATKTVTVPVRAGNNT FT VRLSPTSSAGLPNVDYVDAEVTGDDTTPPSGSALYVSPGGSDGASGTESDPTTLTSAID FT RVSPGGTIYLRGGTYRYAQTVTVPQGNDGTSGDRTELTAYPGETPVLNFSAQSESSSNR FT GLAVNGSYWHVKGIVVEHAGDNGIFVGGSNNVFERTVTRFNRDTGLQLSRTTSDTPRDQ FT WPSNNLILSAESHDNADSDGEDADGFAAKLTVGPGNVFRDAVSHNNIDDGWDLYTKSET FT GAIGAVTIEDSLAYENGTLSDGTQNSSGDRNGYKLGGEDIEVDHVVRRSIAYRNGKHGF FT TYNSNPGTMTISDNVSIDNAERNFSFDKGTSVFRNNTSCRADDGSNDKTVGDADGSNQF FT WTGSNGSRCAAYAGALDWSFDSDGTLVVTFGGNRVIP" XX SQ Sequence 1665 BP; 297 A; 620 C; 531 G; 217 T; 0 other; 2305226872 CRC32; gtgtccgacg ggaagacccg ggaaagcgct ttctccagtc gatcctccca ccgagtcctg 60 gtcggaccca acccccctgg agacacgatg caagtgagac ccgtcatcgc gagcgtcgcc 120 ctgctgggcg gcacgctcgt cgctctgtcc ggcacgtccg cgcaggccgc ggccgcccgc 180 tacgaggccg aaaccgcgtc ggcggtctgc accggcacca tcgactccga ctggtccggc 240 tactccggca gcggtttctg caacggcacc aacgcggtcg gcgcctacgc gcagttcacg 300 gtgagcgcgc ccgccgcggg caccgcgacg ctgaacgtgc gcttcgcgaa cggcaccgac 360 ggcgcacgag ctgcgaacat catggtgaac ggttcgagtg tcgcctcggc ctcgttcgag 420 accaccggcg cctgggacac ctgggcgacg aagaccgtca cggtgccggt gcgcgccggg 480 aacaacaccg tcaggctcag ccccacctcg tccgccggac tgcccaacgt cgactacgtc 540 gacgccgagg tgaccggcga cgacaccacg ccgccgtccg gctccgcgct gtacgtgtcg 600 ccgggcggca gcgacggcgc gtccgggacg gagtccgacc cgaccaccct cacctcggcg 660 atcgaccggg tctcccccgg cgggacgatc tacctgcgcg gcggcaccta ccggtacgcg 720 cagacggtca ccgtcccgca gggcaacgac ggcacttcgg gcgaccgcac cgagctgacc 780 gcctacccgg gcgagacgcc ggtgctgaac ttctcggccc agtcggagag ttcctcgaac 840 cgggggctcg cggtcaacgg gtcgtactgg cacgtcaagg ggatcgtcgt cgaacacgcc 900 ggggacaacg gcatcttcgt cggcggcagc aacaacgtgt tcgagcgcac ggtgacgcgc 960 ttcaaccgcg acaccgggtt gcagctctcg cggacgacct cggacacccc ccgcgaccag 1020 tggccgtcca acaacctgat cctgagcgcc gagtcgcacg acaacgccga ctccgacggc 1080 gaggacgccg acggcttcgc cgccaagctc accgtcggcc cgggcaacgt cttccgcgac 1140 gccgtgtccc acaacaacat cgacgacggc tgggacctct acaccaagtc cgagacgggc 1200 gcgatcggcg cggtcaccat cgaggactcc ctggcctacg agaacggcac cctctccgac 1260 ggcacgcaga actccagcgg tgaccgcaac ggctacaagc tcggcggcga ggacatcgag 1320 gtcgaccacg tggtgcgccg cagcatcgcc taccggaacg gcaagcacgg gttcacctac 1380 aactcgaacc cgggcacgat gacgatctcg gacaacgtga gcatcgacaa cgccgagcgc 1440 aacttctcct tcgacaaggg aacttcggtg ttccggaaca acacctcgtg ccgcgccgac 1500 gacgggtcga acgacaagac cgtgggcgac gccgacgggt cgaaccagtt ctggaccggc 1560 tcgaacggct cccggtgcgc cgcgtacgcg ggcgccctcg actggtcctt cgactcggac 1620 ggcacgctcg tggtgacctt cggcggcaac cgggtcattc cgtag 1665 // |
|