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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB82677; SV 1; linear; genomic DNA; STD; PLN; 1491 BP.
XX
PA   AL162295.1
XX
DE   Arabidopsis thaliana (thale cress) pectinesterase-like protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1491
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="3"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             join(AL162295.1:46213..46651,AL162295.1:46848..47246,
FT                   AL162295.1:47331..47522,AL162295.1:47619..47750,
FT                   AL162295.1:48156..48484)
FT                   /gene="T4C21_140"
FT                   /product="pectinesterase-like protein"
FT                   /note="strong similarity to pectinesterase, sweet orange,
FT                   PIR:T10494"
FT                   /note="Contains ATP/GTP-binding site motif A (P-loop)
FT                   AA215-222;Crystallins beta and gamma 'Greek key' motif
FT                   signature AA313-328;Pectinesterase signatures AA344-351"
FT                   /db_xref="GOA:Q84R10"
FT                   /db_xref="HSSP:1GQ8"
FT                   /db_xref="InterPro:IPR006501"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q84R10"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAB82677.1"
FT                   /translation="MSTFVKVTDLITIMFFLAIAAVITASNTAELDVLEMARTAVVEAK
FT                   TSFGSMAVTEATSEVAGSYYKLGLSECEKLYDESEARLSKLVVDHENFTVEDVRTWLSG
FT                   VLANHHTCLDGLIQQRQGHKPLVHSNVTFVLHEALAFYKKSRARQGHGPTRPKHRPTRP
FT                   NHGPGRSHHGPSRPNQNGGMLVSWNPTSSRADFVVARDGSATHRTINQALAAVSRMGKS
FT                   RLNRVIIYIKAGVYNEKIEIDRHMKNIMLVGDGMDRTIVTNNRNVPDGSTTYGSATFGV
FT                   SGDGFWARDITFENTAGPHKHQAVALRVSSDLSLFYRCSFKGYQDTLFTHSLRQFYRDC
FT                   HIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSEFEAVKGRFKSY
FT                   LGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNW
FT                   PGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV"
XX
SQ   Sequence 1491 BP; 427 A; 299 C; 388 G; 377 T; 0 other; 2653444627 CRC32;
     atgtccacgt ttgtaaaagt caccgactta atcactatca tgttctttct agccattgct        60
     gccgtcataa ccgcctcaaa cacagccgag ttggatgtac ttgaaatggc tagaactgct       120
     gtggttgaag ccaagactag ttttgggtca atggctgtga ctgaggcaac tagtgaagtt       180
     gctggtagtt attataaatt ggggttaagt gaatgcgaga agctctacga tgagagtgaa       240
     gctaggctat cgaaactggt cgtagatcat gagaatttca ccgttgaaga tgttagaacg       300
     tggctaagtg gcgtgcttgc gaatcatcac acttgtttag acggtttaat tcagcaacgt       360
     caaggtcata agcctttggt ccatagcaac gtcacgttcg tgctccatga agctttggct       420
     ttctacaaaa agtctagagc gagacagggc catggaccaa cgagaccaaa acatagacca       480
     acgagaccaa atcatggacc aggaagatca caccatggac catcaagacc aaaccaaaac       540
     ggtggaatgt tagtgtcatg gaatccaaca agttcaaggg cagatttcgt ggtggctcgg       600
     gacggttcgg cgactcatcg gacgataaac caagcattag ccgccgtttc aagaatgggt       660
     aaaagtcggt tgaatagagt gataatatac ataaaagctg gtgtttataa cgaaaaaatc       720
     gaaatagata gacacatgaa aaacatcatg ctagttggtg atggtatgga ccgtacaatt       780
     gtcaccaata accgaaacgt cccggacggt tccacgactt atggatcagc gacattcgga       840
     gtgtccgggg atggattttg ggcacgggac ataacgttcg agaatactgc aggaccacat       900
     aaacatcaag ctgtggcgtt gagagtgagc tcagacttgt ctttattcta tcggtgtagt       960
     ttcaaaggat atcaagatac tcttttcacg cactcacttc gtcaattcta ccgcgattgt      1020
     catatttatg gtacgattga tttcatattt ggagatgcgg cagctgtttt tcagaactgt      1080
     gatatatttg tgaggcggcc tatggatcat caaggcaaca tgatcacagc tcaaggaaga      1140
     gacgacccac atacaaattc agaattcgaa gcagttaaag gccggtttaa gagctacttg      1200
     ggccggccat ggaagaagta ctcacggaca gtgtttctca aaacagatat cgacgagttg      1260
     attgacccga gagggtggag agaatggagt ggcagttatg ctttgtcgac gttgtattac      1320
     ggcgagttta tgaacaccgg agctggagca gggactggta gaagggtgaa ctggccggga      1380
     tttcacgtcc tacgcggtga ggaagaggct tctccgttta ccgtcagccg attcatacaa      1440
     ggagattctt ggatccctat caccggtgtg ccgttttcag ctggggtttg a               1491
//
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