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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB80980; SV 1; linear; genomic DNA; STD; PLN; 1497 BP.
XX
PA   AL161545.2
XX
DE   Arabidopsis thaliana (thale cress) putative beta-amylase
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1497
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(AL161545.2:153954..154745,
FT                   AL161545.2:154889..154999,AL161545.2:155097..155307,
FT                   AL161545.2:155406..155788))
FT                   /gene="AT4g17090"
FT                   /product="putative beta-amylase"
FT                   /note="ESTs GB:T20460, H77080, R86813 mark 5'end, ESTs
FT                   GB:AI099858, AA586150 mark 3'end"
FT                   /note="strong similarity to Beta-Amylase (EC 3.2.1.2),
FT                   Glycine max"
FT                   /note="Contains Beta-amylase active sites AA117-125"
FT                   /note="contains EST gb:AI995041.1, T45443, H37046, H77080,
FT                   T20460, AI099858, AA394409"
FT                   /db_xref="GOA:O23553"
FT                   /db_xref="HSSP:1BYB"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:O23553"
FT                   /protein_id="CAB80980.1"
FT                   /translation="MKFTHEKTFTPEGETLEKWEKLHVLSYPHSKNDASVPVFVMLPLD
FT                   TVTMSGHLNKPRAMNASLMALKGAGVEGVMVDAWWGLVEKDGPMNYNWEGYAELIQMVQ
FT                   KHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDKSGRRNPEYISLGC
FT                   DSVPVLRGRTPIQVYSDFMRSFRERFEGYIGGVIAEIQVGMGPCGELRYPSYPESNGTW
FT                   RFPGIGEFQCYDKYMKSSLQAYAESIGKTNWGTSGPHDAGEYKNLPEDTEFFRRDGTWN
FT                   SEYGKFFMEWYSGKLLEHGDQLLSSAKGIFQGSGAKLSGKVAGIHWHYNTRSHAAELTA
FT                   GYYNTRNHDGYLPIAKMFNKHGVVLNFTCMEMKDGEQPEHANCSPEGLVKQVQNATRQA
FT                   GTELAGENALERYDSSAFGQVVATNRSDSGNGLTAFTYLRMNKRLFEGQNWQQLVEFVK
FT                   NMKEGGHGRRLSKEDTTGSDLYVGFVKGKIAENVEEAALV"
XX
SQ   Sequence 1497 BP; 460 A; 306 C; 405 G; 326 T; 0 other; 1836073007 CRC32;
     atgaagttca ctcacgagaa gaccttcacg ccagaaggtg aaacccttga gaaatgggag        60
     aagctccacg ttctctcata cccacactcc aagaacgacg ctagcgttcc ggtgttcgtc       120
     atgttaccgc tcgacacagt aacaatgtca gggcatttga acaaaccacg agccatgaac       180
     gctagtttga tggccctgaa aggagctggt gtggaaggtg tgatggtgga tgcttggtgg       240
     ggattggtgg agaaagatgg acctatgaat tataactggg aaggctatgc cgagcttata       300
     cagatggttc aaaagcacgg tctcaaactc caggtcgtta tgtcattcca tcaatgtgga       360
     ggaaacgtag gagactcttg cagtatcccc ttgcctccat gggtgcttga agagatcagc       420
     aagaaccctg atcttgtcta cacagacaaa tctgggagaa ggaaccctga atatatctcc       480
     ttgggatgtg attctgtgcc tgtcctaaga ggaagaacac ctatccaggt ctactcagat       540
     ttcatgagga gcttccgtga acgatttgaa ggctacatag gaggagttat tgcggaaatt       600
     caagtaggaa tgggaccttg tggagaattg agatacccat cataccctga gagcaacggg       660
     acctggagat tccccggaat tggagagttc cagtgctacg acaagtatat gaaatcgtca       720
     cttcaagcat atgctgagtc aatcgggaaa actaactggg gaacaagtgg acctcatgat       780
     gccggcgagt acaagaacct cccagaagat actgaatttt tcaggagaga cggaacatgg       840
     aatagcgagt atggaaagtt tttcatggaa tggtactccg ggaagctgct agaacatgga       900
     gaccaactcc tatcttcagc gaaaggtatc tttcaaggaa gcggagcaaa gctatcagga       960
     aaggtagctg gaattcactg gcactacaac accaggtcac acgcagctga gctaaccgct      1020
     ggatactaca acacaagaaa ccatgacggg tatctgccaa tagctaagat gttcaacaaa      1080
     catggagttg tgctcaactt cacctgcatg gagatgaaag acggggagca acctgagcac      1140
     gcgaattgct caccagaagg tctggtcaag caagtacaga acgcgacaag gcaggccgga      1200
     accgaactag caggggagaa cgcgctagaa cgatatgact caagcgcatt cggacaagtg      1260
     gtagcaacaa ataggtcaga ttctggaaat gggttaaccg catttactta cctaagaatg      1320
     aacaagcggt tatttgaggg tcaaaattgg cagcagttag tggagtttgt taagaacatg      1380
     aaggaaggtg gtcatgggag gagactctca aaagaagaca caactggaag tgacctttat      1440
     gttggatttg tcaaaggcaa gatcgctgag aatgtggagg aggctgcttt agtgtaa         1497
//
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