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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB80468; SV 1; linear; genomic DNA; STD; PLN; 1950 BP.
XX
PA   AL161592.2
XX
DE   Arabidopsis thaliana (thale cress) LG127/30 like gene
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1950
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(AL161592.2:165639..166002,
FT                   AL161592.2:166087..166203,AL161592.2:166296..166594,
FT                   AL161592.2:166699..166777,AL161592.2:166859..166965,
FT                   AL161592.2:167051..167212,AL161592.2:167312..167482,
FT                   AL161592.2:167581..167728,AL161592.2:167822..168049,
FT                   AL161592.2:168387..168502,AL161592.2:168596..168668,
FT                   AL161592.2:169078..169163))
FT                   /gene="AT4g38030"
FT                   /product="LG127/30 like gene"
FT                   /note="strong similarity to LG127/30-like protein,
FT                   PID:e1270771"
FT                   /note="contains EST gb:AI998022.1, AA728496, AW036190.1,
FT                   Z17718"
FT                   /db_xref="GOA:Q9SZK3"
FT                   /db_xref="InterPro:IPR010325"
FT                   /db_xref="UniProtKB/TrEMBL:Q9SZK3"
FT                   /protein_id="CAB80468.1"
FT                   /translation="MVSQKKIASLFICFLLLLLLPLSFSKPTRNLDGISARAPTVQQIR
FT                   SRHHGTREVIVDNGIIRVSFSNPQGLITGIKYKGIDNVLHPHLRDRGIEGTNFRIITQT
FT                   QEQVEISFSRTWEDGHIPLNVDKRYIIRRNTSGIYMYGIFERLPEWPELDMGLIRIAFK
FT                   LNPERFHYMAVADNRQREMPTEDDRDIKRGHAKALGYKEAVQLTHPHNSMFKNQVDDKY
FT                   QYTCEIKDNKVHGWISTKSRVGFWIISPSGEYRSGGPIKQELTSHVGPTAITTFISGHY
FT                   VGADMEAHYRPGEAWKKVLGPVFIYLNSDSTSNNKPQDLLWEDAKQQSEKEVKAWPYDF
FT                   VASSDYLSRRERGSVTGRLLVNDRFLTPGKSAYVGLAPPGEAGSWQTNTKGYQFWTKTN
FT                   ETGYFTIENVRPGTYNLYGWVPGFIGDFRYQNLVNVAAGSVISLGRVVYKPPRNGPTLW
FT                   EIGVPDRTAREYFIPEPYKDTMNPLYLNHTDKFRQYGLWQRYTELYPTHDLVYTVGVSN
FT                   YSQDWFYAQVTRKTGDLTYVPTIWQIVFHLPYVNSRGSYTLQVALASAAWANLQVRINN
FT                   QNSWPFFSTGTIGKDNAIARHGIHGMYRLYTIDVPGRLLRTGTNTIYLRQPKAQGPFEG
FT                   LMYDYIRLEEPSRA"
XX
SQ   Sequence 1950 BP; 596 A; 424 C; 446 G; 484 T; 0 other; 2190090096 CRC32;
     atggtatcgc agaagaagat cgcttcgtta tttatttgtt tccttctgtt gcttcttctt        60
     ccactctcct tttccaagcc gacaaggaac ttagatggaa taagtgcaag agctccaaca       120
     gtgcagcaga taagaagcag acatcatggg actagagagg tgatagtgga caatgggata       180
     atcagagtca gtttctcgaa tcctcaagga cttataactg ggatcaaata caaaggaatt       240
     gataatgttc ttcatccaca tctccgagat agaggaatcg aaggaacaaa ttttagaatc       300
     atcactcaaa cccaagaaca agtggagata tcgttctcta gaacatggga ggatggtcat       360
     attccattaa acgtagacaa gaggtatatc atacgtagaa atacttcagg aatctacatg       420
     tacggaatct tcgagagact tcccgaatgg ccagaactcg acatgggttt aattcgaatc       480
     gctttcaaac tcaaccctga gagatttcat tacatggcgg tggcggataa tcgacaaaga       540
     gaaatgccaa cggaagatga ccgtgacatc aaacgtggtc atgccaaggc tcttggttat       600
     aaagaggctg tacaattgac tcatcctcat aactccatgt tcaaaaacca ggtggatgat       660
     aagtaccagt acacatgtga gatcaaagac aacaaagtgc acggttggat ctcaaccaag       720
     tcccgtgtcg gcttttggat catctcacca agcggtgaat atcgctccgg tggaccgatc       780
     aaacaagagc tcacgtctca cgtcggaccc acggccatca cgacttttat aagcggacat       840
     tatgttggtg cggacatgga ggcacattac agacctggtg aagcgtggaa aaaggtcttg       900
     ggacctgttt ttatttactt aaactctgat tctaccagca acaataagcc tcaagatttg       960
     ttatgggaag atgctaaaca acagtccgaa aaagaagtca aagcctggcc gtacgatttt      1020
     gtagcatcct ctgactatct ttctcgtcga gaaagaggaa gcgtcactgg tcgtctacta      1080
     gtcaacgaca gattcttgac gccgggaaaa tctgcatatg tcggtttagc accgccggga      1140
     gaagctggtt cgtggcagac aaatactaag ggatatcagt tttggaccaa gacgaacgaa      1200
     accggttact tcacgataga aaacgttaga ccgggaactt acaatctgta tggatgggtt      1260
     cctggtttta tcggggactt tcgataccaa aaccttgtta acgtagctgc aggttcagtg      1320
     attagtctcg gtagagtcgt gtacaagcca cctaggaacg gtccaacgtt atgggagatt      1380
     ggtgtaccgg atcgaaccgc tcgagaatac tttataccgg agccatacaa ggatacaatg      1440
     aatccgttat acctaaacca caccgacaag tttagacagt acggactgtg gcaacgatac      1500
     acagagttat atccaactca tgatctcgtc tacacagttg gagttagtaa ctatagccaa      1560
     gactggttct acgcccaagt cacaaggaaa accggtgatt taacgtacgt accaacaata      1620
     tggcagatcg tgtttcatct tccatacgta aactcgcgag gcagctacac attgcaggta      1680
     gctttagcct cggctgcatg ggctaatcta caagttcgga tcaataacca aaactcgtgg      1740
     ccgtttttct caacgggtac tatcggaaaa gacaatgcta tagcaagaca tggaatccat      1800
     ggaatgtacc ggctttatac catcgatgtg cctggaaggt tgctaagaac cgggaccaac      1860
     acgatttatc ttcgacagcc taaagcacaa ggaccatttg aaggtcttat gtatgattac      1920
     attcgtctag aagagccttc tagagcttag                                       1950
//
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