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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB80370; SV 1; linear; genomic DNA; STD; PLN; 918 BP.
XX
PA   AL161590.2
XX
DE   Arabidopsis thaliana (thale cress) methionyl aminopeptidase-like protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..918
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             join(AL161590.2:142725..142773,AL161590.2:143218..143438,
FT                   AL161590.2:143522..143683,AL161590.2:143775..143816,
FT                   AL161590.2:143909..143980,AL161590.2:144077..144156,
FT                   AL161590.2:144265..144362,AL161590.2:144442..144635)
FT                   /gene="AT4g37040"
FT                   /product="methionyl aminopeptidase-like protein"
FT                   /note="non-consensus GC splice site pred. by NetGene2 at
FT                   donor site of first intron"
FT                   /note="strong similarity to methionine aminopeptidase,
FT                   Mycobacterium tuberculosis, PATCHX:E1172953"
FT                   /note="contains EST gb:AA394671, AA720204"
FT                   /db_xref="GOA:Q9FV50"
FT                   /db_xref="HSSP:1C24"
FT                   /db_xref="InterPro:IPR002467"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9FV50"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAB80370.1"
FT                   /translation="MAGVKSLQPRLISSFLDEVIDGKRKRLRPGNVSPRRPVPGHITKP
FT                   PYVDSLQAPGISSGLEVHDKKGIECMRASGILAARVRDYAGTLVKPGVTTDEIDEAVHN
FT                   MIIENGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRPLEDGDIINIDVTVYLNGYHGD
FT                   TSATFFCGNVDEKAKKLVEVTKESLDKAISICGPGVEYKKIGKVIHDLADKHKYGVVRQ
FT                   FVGHGVGSVFHADPVVLHFRNNEAGRMVLNQTFTIEPMLTIGSRNPIMWDDNWTVVTED
FT                   ASLSAQFEHTILITKDGAEILTKC"
XX
SQ   Sequence 918 BP; 268 A; 180 C; 217 G; 253 T; 0 other; 3750610264 CRC32;
     atggcgggcg tgaaatctct gcaacctaga ctcatatctt cctttctcga tgaagttatt        60
     gatggcaaga gaaaacgtct gagaccggga aatgtatctc ctcgtcgtcc tgttccgggt       120
     catataacaa aacctcctta tgttgattct cttcaagctc ccggaatctc aagtggactt       180
     gaagttcatg ataagaaagg tatagaatgc atgagagctt ctggaatact tgcagctagg       240
     gttcgagatt acgctggcac tttggttaag ccaggcgtaa ccactgatga aatcgatgaa       300
     gcagttcaca atatgattat tgagaatgga gcttatcctt cgcctcttgg ttatggaggt       360
     ttcccgaaaa gtgtttgcac atctgtgaat gaatgcattt gccatggtat accagattca       420
     agaccacttg aggatgggga tattatcaac atcgatgtca cagtttattt gaatggttat       480
     catggtgata cttcagcaac tttcttctgt ggaaatgttg acgagaaggc taaaaagcta       540
     gtcgaggtga cgaaagagtc tctcgacaaa gcaatatcaa tatgtggtcc cggagttgag       600
     tacaagaaaa tcggcaaagt cattcatgat cttgcagata aacataaata tggagttgtt       660
     cgacaatttg taggccacgg ggttggcagc gtcttccacg ctgatccagt tgttctgcat       720
     ttccggaaca atgaagctgg acgtatggtc ttgaatcaaa ccttcaccat tgaaccgatg       780
     cttacaatag gaagcagaaa cccgataatg tgggatgata actggaccgt ggtaacagaa       840
     gatgcaagcc tctcggcgca attcgagcat accattctta taaccaaaga tggtgctgag       900
     attctaacca agtgttaa                                                     918
//
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