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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB80103; SV 1; linear; genomic DNA; STD; PLN; 1725 BP.
XX
PA   AL161584.2
XX
DE   Arabidopsis thaliana (thale cress) putative protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1725
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(AL161584.2:63699..64061,
FT                   AL161584.2:64145..65032,AL161584.2:65084..65286,
FT                   AL161584.2:65375..65645))
FT                   /gene="AT4g33860"
FT                   /product="putative protein"
FT                   /note="similarity to xylan endohydrolase isoenzyme X-I,
FT                   Hordeum vulgare, PID:g1813595"
FT                   /db_xref="GOA:O81754"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:O81754"
FT                   /protein_id="CAB80103.1"
FT                   /translation="MFVVILVVIITLFVLVQCLEIPLKPQYNGGIIVSPDVRDGTLGWT
FT                   PFGNAKVDFRKIGNHNFFVARDRKQPFDSVSQKVYLEKGLLYTFSAWLQVSKGKAPVKA
FT                   VFKKNGEYKLAGSVVAESKCWSMLKGGLTVDESGPAELYFEVYFSVNCCQFLRSSEDTT
FT                   VEIWVDSVSLQPFTQEEWNSHHEQSIQKERKRTVRIRAVNSKGEPIPKATISIEQRKLG
FT                   FPFGCEVEKNILGNKAYQNWFTQRFTVTTFANEMKWYSTEVVRGKEDYSTADAMLRFFK
FT                   QHGVAVRGHNILWNDPKYQPKWVNALSGNDLYNAVKRRVFSVVSRYKGQLAGWDVVNEN
FT                   LHFSYFEDKMGPKASYNIFKMAQAFDPTTTMFMNEYNTLEESSDSDSSLARYLQKLREI
FT                   RSIRVCGNISLGIGLESHFKTPNIPYMRSALDTLAATGLPIWLTEVDVEAPPNVQAKYF
FT                   EQVLREGHAHPQVKGIVTWSGYSPSGCYRMCLTDGNFKNVPTGDVVDKLLHEWGGFRRQ
FT                   TTGVTDADGYFEASLFHGDYDLKIAHPLTNSKASHSFKLTSDVSSSQNQPSSFVFRV"
XX
SQ   Sequence 1725 BP; 487 A; 361 C; 399 G; 478 T; 0 other; 969287476 CRC32;
     atgttcgttg taattcttgt tgttataatt actctgtttg ttttggtgca gtgtctagag        60
     atacctttaa aaccacagta caatggagga atcatcgtca gccctgacgt acgagatggc       120
     accctaggct ggacaccatt cggaaacgcg aaagtcgatt tcagaaaaat tggaaaccat       180
     aatttttttg ttgcacgaga caggaaacaa ccttttgata gtgtctcaca gaaggtttat       240
     ttggaaaagg gacttctcta cactttctct gcttggttac aagtaagtaa aggaaaggct       300
     cctgtgaaag cagttttcaa gaagaatggt gaatataagc ttgctggttc ggttgttgct       360
     gaatccaaat gctggtccat gcttaagggt ggtctcactg ttgatgaatc tggtcctgcc       420
     gaactctatt ttgaggtata tttttctgtg aattgttgcc agtttctgcg ttccagtgaa       480
     gacacaactg ttgagatttg ggttgatagc gtctcgttgc aaccattcac gcaagaagag       540
     tggaactctc accatgaaca aagcattcag aaggagagaa agagaaccgt gagaatcaga       600
     gccgtgaaca gcaaaggcga gccaataccg aaagcaacca tttccattga acagaggaaa       660
     ctcggattcc cattcgggtg cgaggtagaa aagaacattc ttgggaacaa agcataccaa       720
     aactggttca ctcaaagatt tacagtgaca actttcgcga acgagatgaa atggtacagc       780
     acagaagttg taagaggcaa agaggactat tcaacggctg acgcgatgtt gcgattcttc       840
     aagcagcatg gggttgctgt acgtggccac aatattttat ggaatgatcc taagtaccaa       900
     cctaaatggg tgaatgctct gtctggtaac gacctctaca acgctgtgaa acgaagggtt       960
     ttctcggtgg tctcacgata caaaggccag cttgcgggtt gggacgttgt gaatgagaat      1020
     ctccatttct cctactttga ggacaagatg ggtcctaaag cctcatataa catctttaag      1080
     atggcgcaag cttttgatcc tacgacaacc atgtttatga atgaatacaa tacgttagag      1140
     gaatcaagcg attcagattc tagtctagca aggtatttac agaagcttag ggagattaga      1200
     tctatccgag tttgtggtaa catatctcta gggatcggtc tcgagtctca tttcaagact      1260
     cctaacattc cgtacatgag atcagctctt gacactcttg ccgctactgg tttgcctata      1320
     tggcttactg aggttgacgt cgaagctcct ccaaatgtcc aagccaagta ttttgagcag      1380
     gtcctaaggg aaggccacgc acatccgcaa gtgaaaggaa tagtgacgtg gtcaggttat      1440
     tctccatcag gttgctaccg aatgtgccta accgatggaa acttcaagaa cgtacccact      1500
     ggtgacgttg tggacaaact tctccatgaa tggggaggct tccgcagaca aaccacaggt      1560
     gtcactgatg ctgatggata ctttgaagct tctctcttcc atggtgacta cgatctcaag      1620
     attgctcatc ctctcaccaa ttcaaaagct tctcacagct ttaagctgac ttctgatgtc      1680
     tcttcctcac agaatcaacc atcttctttt gtctttcgtg tttaa                      1725
//
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