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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB80098; SV 1; linear; genomic DNA; STD; PLN; 1611 BP.
XX
PA   AL161584.2
XX
DE   Arabidopsis thaliana (thale cress) beta-xylan endohydrolase-like protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1611
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(AL161584.2:46880..47245,
FT                   AL161584.2:47332..48126,AL161584.2:48435..48533,
FT                   AL161584.2:48591..48781,AL161584.2:48991..49150))
FT                   /gene="AT4g33810"
FT                   /product="beta-xylan endohydrolase-like protein"
FT                   /note="similarity to (1, 4)-beta-xylan endohydrolase
FT                   isoenzyme X-II, Hordeum vulgare, gb:U59313"
FT                   /db_xref="GOA:O81897"
FT                   /db_xref="InterPro:IPR001000"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/TrEMBL:O81897"
FT                   /protein_id="CAB80098.1"
FT                   /translation="MKPPRSSETKGLLQFSRSVEDDSDEEWKIDGSGSIREMTQRIQLH
FT                   EGNIYSFSAWVKLREGNNKKVGVVFRTENGRFVHGGEVRAKKRCWTLLKGGIVPDVSGS
FT                   VDIFFEVQQLAIYSDDKEAKISASDVSLKQFSKQEWKLKQDQLIEKIRKSKVRFEVTYQ
FT                   NKTAVKGAVISIEQTKPSFLLGCAMNFRILQSEGYRNWFASRFKITSFTNEMKWYTTEK
FT                   ERGHENYTAADSMLKFAEENGILVRGHTVLWDDPLMQPTWVPKIEDPNDLMNVTLNRIN
FT                   SVMTRYKGKLTGWDVVNENVHWDYFEKMLGANASSSFYNLAFKLDPDVTMFVNEYNTIE
FT                   NRVEVTATPVKVKEKMEEILAYPGNMNIKGAIGAQGHFRPTQPNLAYMRSALDTLGSLG
FT                   LPIWLTEVDMPKCPNQEVYIEEILREAYSHPAVKGIIIFAGPEVSGFDKLTLADKYFNN
FT                   TATGDVIDKLLKEWQQSSEIPKIFMTDSENDEEEVSLLHGHYNVNVSHPWMKNMSTSFS
FT                   LEVTKEMGQRQVVRVVINA"
XX
SQ   Sequence 1611 BP; 528 A; 265 C; 408 G; 410 T; 0 other; 1282399432 CRC32;
     atgaagcctc cacgaagcag tgaaacgaaa ggattattac aatttagccg ctctgtcgaa        60
     gatgactctg atgaagaatg gaaaatagat ggaagtggat ccataagaga aatgacacag       120
     agaattcagc ttcacgaagg aaacatttac agcttctctg cttgggtgaa gttgagagaa       180
     ggaaacaata agaaagtagg agttgtgttt aggacagaaa atggaagatt tgttcatgga       240
     ggtgaagtta gggcaaagaa aagatgttgg actttgctta aaggtggcat tgtgccagat       300
     gtttcaggct ctgtagatat tttcttcgag gtacaacaac tagctatata tagtgatgac       360
     aaagaagcaa agatttctgc aagcgatgtg tccctgaaac agttcagtaa acaagaatgg       420
     aaactgaaac aagaccaact aattgaaaag ataaggaaga gcaaggtgag atttgaagta       480
     acttatcaga acaaaactgc ggtaaaaggc gcagtgatat ctatagaaca aaccaaacca       540
     tctttcctat taggctgcgc aatgaatttc cggatcctac aaagcgaagg gtacagaaat       600
     tggtttgcgt cgcggtttaa aatcacatcc ttcaccaatg aaatgaaatg gtatacaacg       660
     gagaaagaac gtggtcacga gaactacacg gcagctgatt caatgttaaa atttgcggaa       720
     gagaatggaa tattggttag aggtcatact gtgttgtggg atgacccttt aatgcagcca       780
     acttgggtgc caaaaataga agatccaaac gatttgatga atgtgacatt gaaccggata       840
     aactcggtta tgacgagata caaagggaag ttaaccgggt gggacgtggt taatgagaac       900
     gtgcattggg attactttga gaaaatgctt ggtgccaacg cttcgtcaag tttctacaat       960
     ttggctttta agcttgatcc tgatgtgaca atgttcgtta acgagtacaa cacgatagag      1020
     aaccgtgtag aggttaccgc gacgccggtt aaggtgaagg agaagatgga ggagattctt      1080
     gcttacccag gtaacatgaa cattaaagga gctattggag ctcaaggtca ctttcgtcca      1140
     actcagccta acttagctta catgagatct gcattggata ctttaggctc actaggtttg      1200
     cctatctggc ttacagaggt tgatatgcct aagtgcccta atcaggaggt atacattgaa      1260
     gaaattttga gggaagcgta ttcgcatcct gcggttaaag gcatcataat atttgctggg      1320
     cctgaggtgt ctggtttcga caagctgaca cttgcggaca aatacttcaa caacactgca      1380
     acaggagatg taattgacaa gttgctcaag gagtggcagc aatcttcaga gattcccaag      1440
     attttcatga cggattccga gaatgatgaa gaagaggtct cattgttgca tggacattac      1500
     aatgtgaatg taagtcatcc atggatgaag aacatgtcaa ccagtttcag cttggaggta      1560
     actaaggaga tgggtcagcg tcaggtggtt agagttgtaa ttaatgcttg a               1611
//
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