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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB80039; SV 1; linear; genomic DNA; STD; PLN; 1434 BP.
XX
PA   AL161583.2
XX
DE   Arabidopsis thaliana (thale cress) pectinesterase-like protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1434
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             join(AL161583.2:50382..50402,AL161583.2:50760..50877,
FT                   AL161583.2:52454..52582,AL161583.2:52761..53228,
FT                   AL161583.2:53329..53652,AL161583.2:53846..54219)
FT                   /gene="AT4g33220"
FT                   /product="pectinesterase-like protein"
FT                   /note="strong similarity to pectinesterase, Prunus persica,
FT                   X95991"
FT                   /note="Contains Gram-positive cocci surface proteins
FT                   'anchoring' hexapeptide AA464-469;Pectinesterase signatures
FT                   AA310-317"
FT                   /note="contains EST gb:AI995001.1, AA651278, H37261"
FT                   /db_xref="GOA:Q9SMY7"
FT                   /db_xref="HSSP:1GQ8"
FT                   /db_xref="InterPro:IPR006501"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9SMY7"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAB80039.1"
FT                   /translation="MKERKCWFADFSGDRRLQNAVSDCLDLLDFSSEELTWSASASENP
FT                   KGKGNGTGDVGSDTRTWLSAALSNQATCMEGFDGTSGLVKSLVAGSLDQLYSMLRELLP
FT                   LVQPEQKPKAVSKPGPIAKGPKAPPGRKLRDTDEDESLQFPDWVRPDDRKLLESNGRTY
FT                   DVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGI
FT                   DVTVISGNRSFIDGWTTFRSATFAVSGRGFLARDITFQNTAGPEKHQAVALRSDSDLSV
FT                   FFRCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNT
FT                   ITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDV
FT                   VRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFI
FT                   KGNLWLPSTGVTFSDGLYI"
XX
SQ   Sequence 1434 BP; 406 A; 319 C; 351 G; 358 T; 0 other; 3768361639 CRC32;
     atgaaggaac gcaaatgttg gttcgctgat ttcagcggag atcgccggct gcagaatgcg        60
     gtttccgatt gccttgatct gcttgacttt tcttcagagg agctcacttg gtctgcttct       120
     gcttctgaga atccaaaagg taagggcaac ggaacagggg acgttggatc ggacacaagg       180
     acatggttaa gtgctgctct ctccaaccaa gccacttgta tggaaggctt cgatggtacc       240
     tctggtctcg taaaatccct tgtcgctggc agtctcgatc aactatattc tatgcttagg       300
     gaattgttac cacttgtgca accagagcag aaacccaagg ctgtttctaa acctggccct       360
     attgctaaag gaccgaaggc accacctggc cgtaaactca gagacaccga cgaagacgaa       420
     agccttcaat tcccagactg ggtcagaccg gacgatcgta aactattaga atcaaacggt       480
     aggacttacg acgttagtgt agcattggat gggacaggca acttcacaaa gataatggac       540
     gccataaaga aagctcctga ttatagctcg acacgtttcg tcatatacat taaaaaaggt       600
     ttatatttgg agaatgttga gatcaagaag aagaaatgga acattgtaat gttaggtgat       660
     ggcattgacg tgactgttat ttccggtaac cgcagcttca tcgatggttg gaccactttc       720
     cgatcagcta cattcgcggt aagcggaaga ggattcttag caagagatat aacgttccag       780
     aacacagcag ggccagagaa gcatcaggcg gtagcactga gatcagactc tgacctctct       840
     gtgttcttca gatgtgcgat gaggggttat caagatacac tctacacgca caccatgcgt       900
     cagttctacc gtgagtgcac catcacggga acagtagatt ttatatttgg ggatgggact       960
     gttgtgtttc aaaactgtca aattttggct aaaagaggac tccctaacca aaagaacacc      1020
     atcactgcac aaggccggaa agatgtcaac caaccctcag gattctcaat tcaattcagc      1080
     aatatctcgg cggacgcaga tttggtccca tacctaaaca cgacaaggac gtatctagga      1140
     aggccatgga agctatattc gagaacggtt ttcattagga acaatatgag cgacgttgtg      1200
     agacccgaag gatggcttga gtggaacgct gattttgcgt tggacacact cttctacgga      1260
     gagttcatga actacgggcc tggttcagga ctcagcagcc gagtcaaatg gcctggttac      1320
     cacgtcttta acaactcgga tcaggctaac aacttcaccg tttctcagtt cattaaagga      1380
     aatctttggc tgccttctac gggagtaacg tttagtgatg gcttgtatat ctaa            1434
//
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