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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB79353; SV 1; linear; genomic DNA; STD; PLN; 1941 BP.
XX
PA   AL161561.2
XX
DE   Arabidopsis thaliana (thale cress) LG27/30-like gene
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1941
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             join(AL161561.2:97726..97770,AL161561.2:97861..97982,
FT                   AL161561.2:98069..98128,AL161561.2:98205..98324,
FT                   AL161561.2:98400..98519,AL161561.2:98595..98907,
FT                   AL161561.2:98993..99151,AL161561.2:99234..99340,
FT                   AL161561.2:99438..99528,AL161561.2:99620..99761,
FT                   AL161561.2:99865..100021,AL161561.2:100108..100224,
FT                   AL161561.2:100296..100683)
FT                   /gene="AT4g24430"
FT                   /product="LG27/30-like gene"
FT                   /note="strong similarity to LG27/30 gene - Arabidopsis
FT                   thaliana, PID:e1270771"
FT                   /note="contains EST gb:AW036194.1, AI998022.1, AW036393.1,
FT                   AW036190.1, AA728496, AI973706.1"
FT                   /db_xref="GOA:Q9STV1"
FT                   /db_xref="InterPro:IPR010325"
FT                   /db_xref="UniProtKB/TrEMBL:Q9STV1"
FT                   /protein_id="CAB79353.1"
FT                   /translation="MSNQDSVQLDVQESHVVMGNGKVKVTISKPDGFVTGISYQGVDNL
FT                   LETHNEDFNRGYWDLVWSDEGTPGTTGKSERIKGTSFEVVVENEELVEISFSRKWDSSL
FT                   QDSIAPINVDKRFIMRKDVTGFYSYAIFEHLAEWPAFNLPQTRIVYKLRKDKFKYMAIA
FT                   DNRQRKMPLPEDRLGKRGRPLAYPEAVLLVHPVEDEFKGEVDDKYEYSSENKDLKVHGW
FT                   ISHNLDLGCWQIIPSNEFRSGGLSKQNLTSHVGPISLAMFLSAHYAGEDMVMKVKAGDS
FT                   WKKVFGPVFTYLNCLPDKTSDPLSLWQDAKNQMLTEVQSWPYDFPASEDFPVSDKRGCI
FT                   SGRLLVCDKFLSDDFLPANGAFVGLAPPGEVGSWQLESKGYQFWTEADSDGYFAINDIR
FT                   EGEYNLNGYVTGWIGDYQYEQLINITAGCDIDVGNIVYEPPRDGPTVWEIGIPDRSAAE
FT                   FFVPDPNPKYINKLYIGHPDRFRQYGLWERYTELYPKEDLVFTIGVSDYKKDWFFAHVT
FT                   RKMGDDTYQKTTWQIKFKLENVQKSCTYKIRIALATANVAELQVRMNDDDTEKTTPIFT
FT                   TGVIGHDNAIARHGIHGIYRLYNVDVPSEKLVEGDNTLFLTQTMTTTGAFNGLMYDYIR
FT                   LEGPPLDSYSH"
XX
SQ   Sequence 1941 BP; 595 A; 366 C; 468 G; 512 T; 0 other; 2871109321 CRC32;
     atgtcgaacc aagattctgt tcagttggat gtccaagaaa gccatgtggt catgggaaat        60
     ggtaaagtga aagtgaccat atcaaaacca gatggttttg ttaccggaat ctcttaccag       120
     ggcgtcgaca atctactaga aactcacaac gaagatttca atcgagggta ctgggacctt       180
     gtttggagcg atgaagggac gcctggaacc acagggaaat ccgagcggat caaaggcaca       240
     agttttgaag tagtagtgga aaatgaagag ctggtagaaa tttccttctc aaggaaatgg       300
     gattcttctc tccaagacag tattgctcct attaatgttg acaagaggtt cataatgcgt       360
     aaagatgtaa ctggattcta ctcatatgcg atatttgagc atctagcgga atggccagct       420
     tttaacttgc ctcagacaag gattgtctac aagcttcgta aagacaagtt taaatatatg       480
     gcgattgctg ataacaggca gaggaaaatg ccacttccag aggatagatt ggggaaaaga       540
     ggaagacctt tggcttatcc tgaagctgtt cttcttgttc atcctgttga agacgagttt       600
     aaaggagagg ttgatgacaa gtatgagtat tcaagtgaga acaaagatct gaaagtgcat       660
     ggatggatct cacataactt ggatttgggt tgctggcaaa tcattcctag caatgagttc       720
     agatcaggtg gcttgtccaa acagaacctt acttctcatg ttggtcccat cagtcttgct       780
     atgtttttga gtgctcacta cgcgggtgag gatatggtga tgaaggtgaa agcaggggac       840
     tcatggaaga aagtgtttgg tcctgtcttt acttacctca attgcttgcc tgacaaaacc       900
     tctgaccctc tttcgctatg gcaagacgct aaaaaccaga tgttaactga agtccaaagc       960
     tggccttacg atttccctgc ttcagaagac tttccagtgt ccgataagcg cggttgcatc      1020
     agcggtagat tactagtatg cgacaaattt cttagtgatg attttttacc agcaaatggt      1080
     gctttcgtag ggttggctcc accaggagag gttggatcct ggcaattaga atctaaggga      1140
     tatcaattct ggacagaagc agattctgat ggttatttcg cgataaatga tatccgagaa      1200
     ggcgagtata atctcaatgg ttatgtgaca ggatggatag gagactatca atacgaacaa      1260
     ttgattaaca ttactgcagg ctgcgacatt gacgttggca atatcgtgta tgaaccgccc      1320
     cgagatgggc caacagtgtg ggaaataggg atacctgacc ggtctgcagc tgagttcttt      1380
     gttccagacc caaatcccaa atacatcaac aaactatata ttggtcatcc tgataggttt      1440
     aggcaatacg ggctatggga aagatacaca gaactatatc ctaaggaaga tttggtgttc      1500
     accattggcg tcagtgatta caaaaaagat tggttctttg cacacgttac caggaaaatg      1560
     ggagatgata catatcagaa aacaacatgg caaatcaagt tcaagctaga gaatgtacag      1620
     aaaagttgca catacaaaat ccggatcgcg ctagcaactg caaatgtagc agaattacag      1680
     gtgaggatga atgatgatga cacagaaaag actactccta tattcacaac gggtgtaatc      1740
     gggcacgata acgcgattgc aagacatggg atacatggaa tctataggct ttataatgtg      1800
     gatgtaccaa gtgagaagct tgtggaagga gacaacactt tgttcttgac acaaaccatg      1860
     accaccactg gagcctttaa tggtctcatg tatgactata tccgcctcga aggacctcct      1920
     ttagattcat actctcacta g                                                1941
//
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