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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB75808; SV 1; linear; genomic DNA; STD; PLN; 1338 BP.
XX
PA   AL138647.1
XX
DE   Arabidopsis thaliana (thale cress) putative protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1338
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="3"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(AL138647.1:56468..56614,
FT                   AL138647.1:56706..56764,AL138647.1:56850..57000,
FT                   AL138647.1:57477..57564,AL138647.1:57676..57785,
FT                   AL138647.1:57875..57976,AL138647.1:58051..58125,
FT                   AL138647.1:58213..58346,AL138647.1:58526..58763,
FT                   AL138647.1:58984..59203,AL138647.1:59308..59321))
FT                   /gene="F24G16.160"
FT                   /product="putative protein"
FT                   /note="C-terminus (last three exons) perhaps not correct"
FT                   /note="similarity to several bacterial dihydrodipicolinate
FT                   reductases (dapB)"
FT                   /db_xref="GOA:Q8LB01"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8LB01"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAB75808.1"
FT                   /translation="MAANGLMAASSVFLHRPVHPHFSFSSRTNQMVPLGFKGRVSFIGN
FT                   VKRCFPVVLSMGKSETFEEAGNSVAPGNGISIMVNGCSGKMGKAVIKAADSAGVNIVPT
FT                   SFGSVEEAGQTVEVCGKEILVHGPTEREKVLSSVFEKYPELIVVDYTIPSAVNDNAELY
FT                   GKVGVPFVMGTTGGDRTRLYKTVEESKIYAVISPQMGKQVVAFLAAMEIMSEQFPGAFA
FT                   GYSLEVMESHQASKLDASGTAKAVISCFQKLGVSYDMDQIQLIRDPKQQIEVVGVPEEH
FT                   VSGHAFHLYHLTSPDKTVSFEFQHNVCGRSIYAEGTVDAVLFLAKKKPIFQVLRVRYTF
FT                   LSKSDLKGFRHSLRGVGEFRLSSSVRKHLIPVLAYLENEHGLGYVLMKHHEILRFKPRS
FT                   SCILGFYFINVYLGSSEFTESLYKDFAREEEEEEEEEEEEARNREF"
XX
SQ   Sequence 1338 BP; 362 A; 245 C; 345 G; 386 T; 0 other; 155992491 CRC32;
     atggcggcga atgggctaat ggcggcatct agtgtgtttc tccaccgtcc tgtacatccc        60
     catttctcgt tctcttctag aacgaatcaa atggttccac tcggcttcaa aggccgtgtt       120
     agtttcatcg gcaatgtgaa acgctgtttt ccggtggtat tgtcaatggg aaagtcggag       180
     actttcgagg aagctggaaa ttccgttgcg cctggtaacg gcatatcgat catggtgaat       240
     ggatgcagtg gtaaaatggg gaaagctgtc atcaaagcgg cagattctgc tggagtgaat       300
     attgttccta catcatttgg gtctgttgaa gaggctggcc agactgttga ggtctgtgga       360
     aaggagattc ttgtgcatgg tcctactgaa agagaaaagg tgctgtcttc agtgtttgag       420
     aagtatcctg aactaattgt tgtggactac acaattccct ctgcagtaaa tgataatgca       480
     gagctgtatg gcaaagtagg agttccgttc gtaatgggaa caactggagg agacaggaca       540
     agattgtata aaactgtcga ggaatcaaag atttatgctg tgatttctcc acagatgggt       600
     aaacaggttg ttgcgtttct tgcagcaatg gagatcatgt ctgagcagtt tcctggtgca       660
     tttgctggtt attccttaga ggtgatggag tctcatcaag ctagcaaatt ggatgcatct       720
     ggtactgcaa aagctgttat ttcttgcttt cagaaattag gcgtgtctta cgacatggac       780
     cagatacaat taattcgaga tcctaagcag cagattgagg tggtgggtgt tccagaggag       840
     catgtctcgg gtcatgcttt ccatctttat cacttgacat caccagataa aactgtgtcc       900
     tttgagttcc agcacaatgt ttgcggaaga tcaatatatg ctgagggtac tgttgatgca       960
     gtgctattcc ttgccaaaaa gaaaccaatc ttccaagttc tcagagtacg atataccttt      1020
     ttgtcaaaat ctgacctcaa gggttttaga catagtctcc gaggagtggg agagtttcga      1080
     ctttcgagca gtgtgcgtaa gcatctgatc cctgtcttgg cttacttaga gaatgagcac      1140
     ggcttaggtt atgtcttgat gaagcatcac gagattttaa ggtttaagcc cagatcatca      1200
     tgcatcctcg gattttactt catcaatgtc tacttgggat catcggaatt cacagagtct      1260
     ctgtataaag acttcgctcg agaagaagaa gaagaagaag aagaagaaga agaagaagcg      1320
     agaaatagag agttttga                                                    1338
//
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