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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB70171; SV 2; linear; genomic DNA; STD; INV; 1923 BP.
XX
PA   Z83234.2
XX
DE   Caenorhabditis elegans C. elegans protein K09E4.2, partially confirmed by
DE   transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1923
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="II"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="K09E4"
FT   CDS             complement(join(Z83234.2:24048..24338,
FT                   Z83234.2:24501..24608,Z83234.2:25316..25952,
FT                   Z83234.2:26667..26752,Z83234.2:26799..26946,
FT                   Z83234.2:27399..27509,Z83234.2:27557..27968,
FT                   Z83234.2:28891..29020))
FT                   /locus_tag="K09E4.2"
FT                   /standard_name="K09E4.2"
FT                   /product="C. elegans protein K09E4.2, partially confirmed
FT                   by transcript evidence"
FT                   /note="contains similarity to Pfam domain PF05208 ALG3
FT                   protein contains similarity to Interpro domains IPR007873
FT                   (Glycosyltransferase, ALG3), IPR013838 (Beta tubulin,
FT                   autoregulation binding site)"
FT                   /db_xref="GOA:Q9NAP5"
FT                   /db_xref="InterPro:IPR013838"
FT                   /db_xref="UniProtKB/TrEMBL:Q9NAP5"
FT                   /db_xref="WormBase:WBGene00010720"
FT                   /protein_id="CAB70171.2"
FT                   /translation="MRELISRLVVGLFSVNDTGFRAVAALLMIAEAVLSHLVILKVNYT
FT                   EIDWSTYMQQVECYVNKGILNYTQIGGDTGPCVYPAGHLFVFRLLHFFTSSGRNIRAAQ
FT                   HIFQGFYMFNLFMVFRILHKTMRIPPIVLLLVSITGYRIHSIFVLRLFNDPLAMMLFYV
FT                   AMDRFLEQKWLVGCVFYSLAVSIKMNVLLFAPALFFTLLLNNSYMATLGYLTVCGLIQL
FT                   YVGGPFLLYDWKSYLQQSFDLGRVFMFKWTVNWRFLPEEVPPPAGFFLDKRFHAALLVG
FT                   HLTFLAVFASYMWFRRLNGLRTSVYLRLFEGITTTTGAVETYYAFCTSNLIGIAFSRSL
FT                   HYQFYSWYFHQIPFLLFCDYPHVASVSTIPWRQFLWKVPLLAAVELSWNVYPSTWWSSA
FT                   LLHVCHVIIFWHLIVTRPARPGDSVSRETLRRLEQRQKMLEQELREHGQVVPKFKFPAF
FT                   LEEQQEEQVDVRKRMKQPIGEKRTKKQLDAEFETYFEEQMDGFREEHTIYYTHDGKPQV
FT                   SGLAPLDKPEKMKMHEKVAALYTQALKLQAQLNPNETPTTWKSFKFPKNADKNLLESYL
FT                   KLHGAGAQQDSEESEISSAEEEASDDENSGEEEPNTEKIEQNSCKAEASEQESNGGVRR
FT                   RILVD"
XX
SQ   Sequence 1923 BP; 473 A; 476 C; 481 G; 493 T; 0 other; 1448903090 CRC32;
     atgcgagagt taatctctcg gctagtggtt ggcctatttt cggtcaatga tacgggattt        60
     agagcagttg cggcgctgct gatgattgcc gaagccgttt tatcacattt agtcatttta       120
     aaagttaatt acaccgaaat cgactggagc acgtatatgc aacaagtcga gtgctacgtg       180
     aacaagggga tcctcaacta cacgcaaatc ggcggtgaca cgggtccctg cgtctacccg       240
     gccggccatc tcttcgtctt ccgcttgctc cactttttca cgagctccgg ccgcaatatc       300
     cgcgcggctc agcacatttt ccaaggattc tacatgttta atctatttat ggtctttcga       360
     atccttcaca agactatgcg gatcccgccg atcgtgctgc ttctcgtgtc gatcaccggc       420
     tatcggatac actcgatttt cgtgttgcgg ctcttcaacg atcctctagc tatgatgctc       480
     ttctacgtgg caatggatcg gtttttggag caaaaatggc ttgtcggatg tgttttttat       540
     agcctggcag tatcgattaa aatgaacgtg ttgcttttcg cgccggcgct gttcttcaca       600
     cttttgctca acaatagtta tatggcgacg ttgggatatt tgacagtttg cgggctaatc       660
     caactgtacg tcggtggccc attcctcctc tacgactgga aatcgtatct gcaacaatcc       720
     ttcgatttgg gccgagtttt catgttcaaa tggactgtca actggcgatt cttgcccgaa       780
     gaggtacccc cccccgctgg gtttttcctc gacaagcgat tccacgcggc acttttggtt       840
     gggcatttga cgtttttggc ggttttcgcg tcgtacatgt ggtttagacg cctaaacggt       900
     ctccgcacct cggtctacct acgtcttttc gaaggcatca ccaccaccac aggcgccgtc       960
     gagacctact acgccttctg tacctcaaat ctgatcggaa tcgccttctc ccgatccctt      1020
     cactaccagt tctacagttg gtacttccat cagataccgt tccttctctt ctgcgactat      1080
     ccccacgtgg caagtgtctc cacgattccg tggcgtcaat ttctgtggaa agtaccgttg      1140
     ctcgccgccg tcgagctcag ctggaacgtc tatccatcga cgtggtggag ttctgcgttg      1200
     ctccacgttt gccacgtcat cattttctgg catctaatcg tgacgagacc cgcgcgacct      1260
     ggcgattcag tgtccaggga gacgctccga aggcttgagc agcggcagaa aatgcttgag      1320
     caagagctcc gagagcatgg acaagttgtg ccgaaattca aatttccagc gtttttggaa      1380
     gagcagcagg aagagcaagt ggatgttcgg aagaggatga agcagccgat tggggagaag      1440
     aggacgaaaa agcagttgga tgcggaattt gagacgtatt tcgaggagca gatggacgga      1500
     tttcgggagg agcacacgat ttattacacc cacgatggaa aaccgcaagt ttctgggctt      1560
     gcaccactgg ataagccgga aaaaatgaag atgcacgaga aagttgcagc attatatacg      1620
     caggcgctga agctacaagc tcaattaaat cccaatgaaa ctccaacaac atggaaatca      1680
     ttcaaatttc ccaaaaatgc cgacaaaaac ctgctggaaa gctatctgaa gcttcacgga      1740
     gcaggagcac aacaagactc tgaagaatct gaaatttcct cagccgaaga agaagcttca      1800
     gacgacgaga atagcggtga ggaagagccc aatacggaga aaattgagca aaattcgtgt      1860
     aaagctgaag cctcggagca agagagcaat ggaggtgtga ggcggcgaat tttggtcgat      1920
     taa                                                                    1923
//
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