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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB65568; SV 1; linear; genomic DNA; STD; PRO; 999 BP.
XX
PA   AL939114.1
XX
DE   Streptomyces coelicolor putative secreted endoglucanase.
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..999
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL939114.1:65052..66050)
FT                   /transl_table=11
FT                   /gene="SCO2838"
FT                   /gene_synonym="SCE20.12c"
FT                   /product="putative secreted endoglucanase."
FT                   /note="SCE20.12c, possible secreted endoglucanase, len: 332
FT                   aa. Similar to many including: Streptomyces halstedii
FT                   SW:GUN1_STRHA(EMBL:Z12157) endoglucanase 1 precursor (EC
FT                   3.2.1.4) (321 aa), fasta scores opt: 613 z-score: 677.4
FT                   E(): 2.4e-30 37.6% identity in 343 aa overlap and
FT                   Mycobacterium tuberculosis TR:O53607(EMBL:AL021428)
FT                   putative cellulase (380 aa), fasta scores opt: 796 z-score:
FT                   876.5 E():0 44.3% identity in 298 aa overlap. Note that
FT                   codon 10 maybe the true initiation codon. Contains a Pfam
FT                   match to entry PF01341 Glyco_hydro_6, Glycosyl hydrolases
FT                   and an appropriately positioned Prosite hit to PS00013
FT                   Prokaryotic membrane lipoprotein lipid attachment site.
FT                   Also contains a possible N-terminal signal sequence."
FT                   /db_xref="GOA:Q9RDB3"
FT                   /db_xref="HSSP:1TML"
FT                   /db_xref="InterPro:IPR016288"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RDB3"
FT                   /protein_id="CAB65568.1"
FT                   /translation="MSRRRAASAAALGAAALLLAGCSSSGDGDDKAAGAGITQQPKETG
FT                   PFWVNPDGNAAQQVASLADAGKKDQAEEIRKIAQQPTGEWISPENPEEQARGFTEAADE
FT                   AGRTALLVLYNIPHRDCGQYSEGGAADGDAYRSFVDGVAKGIGDRAATVVLEPDAVLHL
FT                   VDGCTPQEFHEERYDLLKGAVAKLGALKNTKVYLDAGNAGWGHPDQIFDPLKRAGVDQA
FT                   DGFAVNVSNFYTTEDSIAYGKQLSAKVGGKPFVIDTSRNGNGPYTEGAPDERWCNPPGR
FT                   ALGETPTTKTADPLVDAYLWVKRPGESDGECKGGPKAGEWYPEYALKLAQG"
XX
SQ   Sequence 999 BP; 177 A; 371 C; 343 G; 108 T; 0 other; 1435996247 CRC32;
     atgtccagga ggcgggctgc gtcggcggcg gcactcggag cggcggccct gctgctcgcg        60
     ggctgctcct cgtccggcga cggggacgac aaggccgcgg gcgccgggat cacccagcag       120
     cccaaggaga ccggcccctt ctgggtcaac ccggacggca acgcggccca gcaggtcgcg       180
     tcccttgccg atgcgggcaa gaaggaccag gccgaagaga tccgcaagat cgcccagcag       240
     ccgaccggcg agtggatcag cccggagaac cccgaggagc aggcccgcgg cttcaccgag       300
     gccgccgacg aggccggccg caccgcgctg ctcgtcctct acaacatccc gcaccgcgac       360
     tgcggccagt actccgaggg cggcgccgcc gacggcgacg cctaccggtc cttcgtcgac       420
     ggcgtggcca agggcatcgg cgaccgtgcc gccaccgtcg tcctggaacc ggacgcggtg       480
     ctccacctcg tcgacggctg caccccgcag gagttccacg aggagcgcta cgacctcctc       540
     aagggcgcgg tcgccaagct cggcgcgctg aagaacacca aggtgtacct ggacgcgggc       600
     aacgccggct ggggccaccc cgaccagatc ttcgaccccc tgaagcgggc cggcgtcgac       660
     caggccgacg gcttcgcggt caacgtgtcg aacttctaca ccaccgagga ctccatcgcc       720
     tacggcaagc agctctccgc caaggtgggc ggcaagccct tcgtcatcga caccagccgc       780
     aacggcaacg gcccctacac cgagggcgcc ccggacgaac gctggtgcaa ccctccgggc       840
     cgggccctcg gcgaaacccc gacgacgaag acggccgacc cgctggtcga cgcctacctc       900
     tgggtcaagc gcccgggaga gtcggacggc gagtgcaagg gcggcccgaa ggcgggggag       960
     tggtaccccg agtacgcctt gaaactggcg caggggtaa                              999
//
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