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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB61795; SV 1; linear; genomic DNA; STD; PRO; 930 BP.
XX
PA   AL939116.1
XX
DE   Streptomyces coelicolor extracellular agarase precursor
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..930
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL939116.1:206755..207684)
FT                   /transl_table=11
FT                   /gene="SCO3471"
FT                   /gene_synonym="dagA"
FT                   /gene_synonym="SCE65.07c"
FT                   /product="extracellular agarase precursor"
FT                   /note="SCE65.07c, dagA, extracellular agarase precursor,
FT                   len: 309 aa; identical to previously sequenced
FT                   SW:AGAR_STRCO (EMBL:X05811) Streptomyces coelicolor
FT                   extracellular agarase precursor (EC 3.2.1.81) DagA, 309 aa
FT                   and similar to TR:Q59078 (EMBL:M73783) Alteromonas
FT                   atlantica (Pseudomonas atlantica) beta-agarase I precursor
FT                   (EC 3.2.1.81), 290 aa; fasta scores: opt: 385 z-score:
FT                   446.1 E(): 1.8e-17; 33.2% identity in 304 aa overlap.
FT                   Contains match to Prosite entry PS01034 Glycosyl hydrolases
FT                   family 16 active sites. Contains N-terminal region signal
FT                   sequence peptide"
FT                   /db_xref="GOA:P07883"
FT                   /db_xref="InterPro:IPR017909"
FT                   /db_xref="UniProtKB/Swiss-Prot:P07883"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAB61795.1"
FT                   /translation="MVNRRDLIKWSAVALGAGAGLAGPAPAAHAADLEWEQYPVPAAPG
FT                   GNRSWQLLPSHSDDFNYTGKPQTFRGRWLDQHKDGWSGPANSLYSARHSWVADGNLIVE
FT                   GRRAPDGRVYCGYVTSRTPVEYPLYTEVLMRVSGLKLSSNFWLLSRDDVNEIDVIECYG
FT                   NESLHGKHMNTAYHIFQRNPFTELARSQKGYFADGSYGYNGETGQVFGDGAGQPLLRNG
FT                   FHRYGVHWISATEFDFYFNGRLVRRLNRSNDLRDPRSRFFDQPMHLILNTESHQWRVDR
FT                   GIEPTDAELADPSINNIYYRWVRTYQAV"
XX
SQ   Sequence 930 BP; 201 A; 290 C; 277 G; 162 T; 0 other; 4220527386 CRC32;
     gtggtcaacc gacgtgatct catcaagtgg agtgccgtcg cactcggagc gggtgcgggg        60
     ctcgcgggtc ccgcacccgc cgctcatgcc gcagacctcg aatgggaaca gtaccccgtg       120
     ccggccgccc ctggcggaaa caggtcctgg cagcttctcc ccagccattc ggacgacttc       180
     aactacaccg gcaagcctca aaccttcagg ggcagatggc tggaccagca caaggatggc       240
     tggtcgggcc cggccaacag cctctacagt gcgcgccatt cctgggtggc tgacggaaat       300
     ctcatcgtcg agggccgcag ggcgccggac gggagggtct actgcggcta cgtgacctcc       360
     cgcaccccag tcgagtaccc tctctatacc gaagtactca tgcgtgtgag cgggctgaag       420
     ctctcatcga atttctggct cctgagcaga gacgacgtca acgagattga cgtgatcgaa       480
     tgctacggca acgagtcatt gcacggaaag cacatgaaca ccgcctacca catattccag       540
     cggaacccct tcactgaact ggcgagaagc cagaaggggt atttcgcaga tgggagctac       600
     gggtacaatg gtgagactgg gcaggtgttt ggggacggcg ccgggcaacc tcttcttcgg       660
     aatggattcc accgctacgg cgtgcactgg ataagcgcca ccgaattcga tttctacttc       720
     aacggcaggt tggtgcgccg gctgaaccgg tcgaacgacc tcagggaccc ccggagccgg       780
     ttcttcgacc agccaatgca tctgatcctc aacaccgaga gtcatcagtg gcgcgtcgac       840
     cgaggtatcg aacccacgga cgcggaactc gcagacccca gcatcaacaa catctactac       900
     cgctgggtca ggacgtatca ggccgtgtag                                        930
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