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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB61738; SV 1; linear; genomic DNA; STD; PRO; 1008 BP.
XX
PA   AL939112.1
XX
DE   Streptomyces coelicolor secreted endo-1,4-beta-xylanase B (xylanase B)
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1008
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL939112.1:38305..39312)
FT                   /transl_table=11
FT                   /gene="SCO2292"
FT                   /gene_synonym="xlnB"
FT                   /product="secreted endo-1,4-beta-xylanase B (xylanase B)"
FT                   /note="SCC75A.38, xlnB, secreted endo-1,4-beta-xylanase B
FT                   (xylanase B), len: 335 aa. Almost identical to Streptomyces
FT                   lividans SW:XYNB_STRLI(EMBL:M64552) endo-1,4-beta-xylanase
FT                   B precursor (xylanase B) (EC 3.2.1.8) (334 aa), fasta
FT                   scores opt: 2266 z-score: 2249.3 E():0 98.2% identity in
FT                   335 aa overlap. Also similar to Streptomyces coelicolor
FT                   TR:CAB52919 (EMBL:AL109949) endo-1,4-beta-xylanase, XlnC
FT                   (241 aa), fasta scores opt: 1087 z-score: 970.6 E():0 71.9%
FT                   identity in 224 aa overlap and to the adjoining CDS on this
FT                   cosmid, AxeA, (335 aa), fasta scores opt: 652 z-score:
FT                   585.8 E(): 2.9e-27 56.2% identity in 201 aa overlap.
FT                   Contains a N-terminal signal sequence, Prosite hits to
FT                   PS00776 Glycosyl hydrolases family 11 active site signature
FT                   1 and PS00777 Glycosyl hydrolases family 11 active site
FT                   signature 2, as well as a Pfam match to entry PF00457
FT                   Glyco_hydro_11, Glycosyl hydrolases family 11."
FT                   /db_xref="GOA:Q9RKN6"
FT                   /db_xref="HSSP:1HIX"
FT                   /db_xref="InterPro:IPR018208"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RKN6"
FT                   /protein_id="CAB61738.1"
FT                   /translation="MNLLVQPRRRRRGPVTLLVRSAWAVALAALAALMLPGTAQADTVV
FT                   TTNQEGTNNGYYYSFWTDSQGTVSMNMGSGGQYSTSWRNTGNFVAGKGWANGGRRTVQY
FT                   SGSFNPSGNAYLALYGWTSNPLVEYYIVDNWGTYRPTGEYKGTVTSDGGTYDIYKTTRV
FT                   NKPSVEGTRTFDQYWSVRQAKRTGGTITTGNHFDAWARAGMPLGNFSYYMIMATEGYQS
FT                   SGSSSINVGGTGGGDNGGGDNGGGGGGCTATVSAGQKWGDRYNLDVSVSGASDWTVTMN
FT                   VPSPAKVLSTWNVNASYPSAQTLTARSNGSGNNWGATIQANGNWTWPSVSCSAG"
XX
SQ   Sequence 1008 BP; 192 A; 361 C; 332 G; 123 T; 0 other; 266624302 CRC32;
     atgaacctgc tcgtccagcc gaggcgtcgc agacgcggtc cggtcacctt gctcgtcagg        60
     agcgcgtggg ccgtcgcgct ggcggcgctc gccgcgctga tgctgccggg caccgcccag       120
     gccgacacgg tcgtcacgac caaccaggag ggcaccaaca acggctacta ctactcgttc       180
     tggaccgaca gccagggcac cgtctccatg aacatgggct ccggcggtca gtacagcacc       240
     tcgtggcgca acaccggcaa cttcgtcgcg ggcaagggct gggccaacgg cggccgccgg       300
     accgtgcagt actcgggcag cttcaacccc tccggcaacg cgtacctggc gctctacgga       360
     tggacgtcga acccgctcgt cgagtactac atcgtcgaca actggggcac ctaccggccc       420
     acgggcgagt acaagggcac cgtcaccagc gacggcggca cctacgacat ctacaagacg       480
     acccgcgtca acaagccctc cgtcgagggc acccgcacct tcgaccagta ctggagcgtc       540
     cggcaggcga agcggaccgg cggcaccatc acgaccggca accacttcga cgcgtgggcc       600
     cgggccggga tgccgctcgg caacttcagc tactacatga tcatggccac cgagggctac       660
     cagagcagcg gcagctccag catcaacgtc ggcgggaccg gcggcggcga caacggcggc       720
     ggcgacaacg ggggcggtgg cggcgggtgc accgccacgg tgtccgccgg gcagaagtgg       780
     ggcgaccggt acaacctcga cgtctccgtc agcggcgcca gcgactggac ggtgacgatg       840
     aacgtgccgt ccccggcgaa ggtcctgtcg acctggaacg tcaacgccag ctatcccagt       900
     gcgcagacgc tgaccgccag gtcgaacggc agcggcaaca actggggcgc caccatccag       960
     gccaacggca actggacctg gcccagcgtg tcctgcagcg cgggctga                   1008
//
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