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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB59650; SV 1; linear; genomic DNA; STD; PRO; 1776 BP.
XX
PA   AL939115.1
XX
DE   Streptomyces coelicolor putative integral membrane protein.
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1776
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             AL939115.1:106568..108343
FT                   /transl_table=11
FT                   /gene="SCO3154"
FT                   /gene_synonym="SCE87.05"
FT                   /product="putative integral membrane protein."
FT                   /note="SCE87.05, possible integral membrane protein, len:
FT                   591 aa. Similar to several of undefined function e.g.
FT                   Mycobacterium tuberculosis TR: O05586 (EMBL: Z94752)
FT                   hypothetical 55.5 KD protein (503 aa), fasta scores opt:
FT                   666 z-score: 775.7 E(): 0 39.0% identity in 544 aa overlap
FT                   and Aeropyrum pernix TR:BAA79111  (EMBL:AP000058) 418aa
FT                   long hypothetical protein (418 aa), fasta scores opt:  201
FT                   z-score: 235.2 E(): 9.9e-06 30.4% identity in 299 aa
FT                   overlap. Contains multiple possible membrane spanning
FT                   hydrophobic domains."
FT                   /db_xref="GOA:Q9RKD3"
FT                   /db_xref="InterPro:IPR003342"
FT                   /db_xref="UniProtKB/TrEMBL:Q9RKD3"
FT                   /protein_id="CAB59650.1"
FT                   /translation="MHSAVPYDGAVTSTASSTDTLHDQAPHDERPTWQQRLRRFGYPAG
FT                   PATGDVRDRLVPPYTSPSPRLWAFLGVSKPLTDRMIRWSAWGGPLLVALFAGVLRFWNL
FT                   GSPKAVIFDETYYAKDAWALIHRGFEVNWDKNANDLILNSGGDVPIPTDAAYVVHPPVG
FT                   KYIIGLGELLFGFDPFGWRFMTALLGTLSVLLLCRIGRRLFRSTFLGCLAGALMALDGL
FT                   HFVMSRTALLDSVLMFFVLAAFGCLVVDRDKARSRLAAALPVDEDGRVRPDAHVAETLR
FT                   LGWRPWRLAAGLMLGLAAATKWNGLYIMAAFCVMAVLWDVGSRRVAGAHRPYRAVLRHD
FT                   LGWAFLSTVPVALATYLLSWLGWILSPSDGTGGYYRDWATKDGANSSWSWLFPDWWRSL
FT                   WHYETQVLEFHTHLTSPHTYQSNPWSWIVLGRPVSYFYESPSAGSDGCPVDAGEKCARE
FT                   VLALGTPLLWWVGCFALLYVLWRWLFRRDWRAGAIACGVAAGYLPWFMYQERTIFLFYA
FT                   VVFLPFLCLAVAMLLGAIIGRPGCTDTRRVAGATGAGVLVLLIAWNFIYFWPLYTGTAI
FT                   PMEEWRARMWLDTWV"
XX
SQ   Sequence 1776 BP; 206 A; 660 C; 605 G; 305 T; 0 other; 2451397272 CRC32;
     gtgcacagcg cggttcccta cgatggcgcg gtgaccagta ccgcgtcctc cacggacacc        60
     ctgcacgacc aggccccgca cgacgagcgg cccacctggc agcagcggct gcgccgcttc       120
     ggctacccgg cggggcccgc gaccggcgac gtccgcgacc ggctggtgcc gccgtacacg       180
     agcccgagcc cgcgcctgtg ggcgttcctg ggggtgtcga agccgctcac cgaccggatg       240
     atccgctggt cggcgtgggg cgggccgctg ctggtggcac tgttcgcggg ggtgctgcgg       300
     ttctggaacc tgggcagccc gaaggcggtg atattcgacg agacgtacta cgccaaggac       360
     gcgtgggcgc tgatccaccg cggcttcgag gtcaactggg acaagaacgc caacgacctc       420
     atcctgaact cgggcggcga cgtcccgatc cccaccgacg cggcgtacgt cgtccacccg       480
     ccggtcggca agtacatcat cggcctcggc gaacttctgt tcggcttcga cccgttcggc       540
     tggcgcttca tgacggcgct gctcggcacg ctgtcggtgc tgctgctgtg ccggatcggc       600
     cgccgcctgt tccgctccac gttcctgggg tgcctggcgg gcgccctgat ggcgctggac       660
     ggcctgcact tcgtgatgag ccgcaccgcg ctgctggaca gcgtgctgat gttcttcgtg       720
     ctggccgcct tcggctgcct cgtcgtcgac cgcgacaagg cccggtcgag actcgccgcc       780
     gcactcccgg tggacgagga cggccgcgtc cgccccgacg cgcacgtcgc ggagaccctc       840
     cgcctcgggt ggcgcccctg gcgcctggcg gcgggcctga tgctgggcct ggcggcggcc       900
     accaagtgga acggcctcta catcatggcg gccttctgcg tgatggcggt gctgtgggac       960
     gtcggctccc gccgcgtcgc gggcgcccac cgcccctacc gcgccgtact ccgccacgac      1020
     ctgggctggg ccttcctctc caccgtcccg gtcgccctgg ccacgtacct cctctcgtgg      1080
     ctcggctgga tcctctcccc ctccgacggc accggcggct actaccgcga ctgggccacg      1140
     aaggacggcg cgaacagctc ctggtcgtgg ctcttccccg actggtggcg cagcctgtgg      1200
     cactacgaga cccaggtcct cgaattccac acccacctga cctcgccgca cacctaccag      1260
     tcgaacccct ggagctggat cgtcctgggc cgcccggtct cctacttcta cgagtccccg      1320
     tcggcgggtt cggacggctg cccggtggac gcgggcgaga agtgcgcccg cgaggtgctg      1380
     gccctgggca cccccctcct gtggtgggtg ggctgcttcg ccctgctgta cgtcctgtgg      1440
     cgctggctct tccgccgcga ctggcgcgcg ggcgccatcg cctgcggcgt ggcggccggc      1500
     tacctgccct ggttcatgta ccaggagcgc acgatcttcc tcttctacgc cgtcgtcttc      1560
     ctgccgttcc tgtgcctggc ggtggccatg ctcctgggcg cgatcatcgg ccgcccgggc      1620
     tgcaccgaca cccgcagagt ggcgggcgcg acgggcgcgg gcgtcctggt gctcctcatc      1680
     gcgtggaact tcatctactt ctggcccctg tacacgggca cggcgatccc gatggaggag      1740
     tggcgggcgc ggatgtggct cgacacgtgg gtctag                                1776
//
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