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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB51963; SV 1; linear; genomic DNA; STD; PRO; 1353 BP.
XX
PA   AL939111.1
XX
DE   Streptomyces coelicolor putative 2-dehydro-3-deoxyphosphoheptonate aldolase
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1353
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL939111.1:170073..171425)
FT                   /transl_table=11
FT                   /gene="SCO2115"
FT                   /gene_synonym="SC6E10.09c"
FT                   /gene_synonym="aroH"
FT                   /product="putative 2-dehydro-3-deoxyphosphoheptonate
FT                   aldolase"
FT                   /note="SC6E10.09c, aroH, probable
FT                   2-dehydro-3-deoxyphosphoheptonate aldolase, len: 450 aa;
FT                   highly similar to many, especially those from plants e.g.
FT                   SW:AROF_ARATH (EMBL:M74819), Dhs1, Arabidopsis thaliana
FT                   phospho-2-dehydro-3-deoxyheptonate aldolase 1 precursor
FT                   (525 aa), fasta scores; opt: 1633 z-score: 1839.4 E(): 0,
FT                   53.8% identity in 437 aa overlap. The N-terminus is similar
FT                   (but not identical) to the SW:AROF_STRCO, AroH,
FT                   Streptomyces coelicolor 2-dehydro-3-deoxyphosphoheptonate
FT                   aldolase N-terminal sequence determined from purified
FT                   protein (TVNAKTSPSA GNTDDPLQAP S). Similar to TR:O52308
FT                   (EMBL:AF035756) Streptomyces sp.
FT                   2-dehydro-3-deoxyphosphoheptonate aldolase (fragment) (448
FT                   aa) (90.4% identity in 448 aa overlap). Also similar to
FT                   TR:Q9Z4X1 (EMBL:AL035654), Aro, S.coelicolor probable
FT                   2-dehydro-3-deoxyheptonate aldolase (484 aa) (53.6%
FT                   identity in 440 aa overlap). An alternative start codon is
FT                   present at codon 3. Contains Pfam match to entry PF01474
FT                   DAHP_synth_2, Class-II DAHP synthetase family"
FT                   /db_xref="GOA:P80574"
FT                   /db_xref="InterPro:IPR002480"
FT                   /db_xref="UniProtKB/Swiss-Prot:P80574"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAB51963.1"
FT                   /translation="MTVNAKTSPSAGNTWRDLPAAQQPEYPDTEALRAVIADLESYPPL
FT                   VFAGECDQLRARMAAVAKGEAFLLQGGDCAEAFDAVSADHIRNKLKTLLQMGAVLTYAA
FT                   SVPVVKVGRIAGQYSKPRSKPTETRDGVTLPTYRGDSVNGFDFTEAARIPDPERLKRMY
FT                   HASASTLNLVRAFTTGGYADLRQVHAWNQDFVKSSPSGQRYEQLAREIDNALNFMRACG
FT                   TDPAEFQTVEFFSSHEALLLDYESALTRVDSRTGQLYDVSGHMVWIGERTRQLDHAHIE
FT                   FASRIRNPIGIKLGPSTTAEEALQYIERLDPEREPGRLTFIVRMGADKIRDKLPELVEK
FT                   VTASGATVAWITDPMHGNTYEAASGHKTRRFDDVLDEVKGFFEVHKSLGTHPGGIHVEL
FT                   TGDDVTECVGGGDEIFVDDLHQRYETACDPRLNRSQSLDLAFLVAEMYRDQ"
XX
SQ   Sequence 1353 BP; 227 A; 508 C; 436 G; 182 T; 0 other; 2115802022 CRC32;
     gtgaccgtga acgctaagac cagcccgagc gctggcaaca cctggcgaga cctgcccgcg        60
     gcgcagcagc ccgagtaccc cgacaccgag gctctgcgcg cagtgatcgc ggacctcgag       120
     tcgtatccgc cgctcgtctt cgcgggcgag tgcgaccagc tgcgcgcccg gatggcggcc       180
     gtcgccaagg gagaggcgtt cctcctccag ggcggcgact gcgccgaggc cttcgacgcg       240
     gtgtccgcgg accacatccg caacaagctc aagaccctcc tccagatggg cgccgtcctc       300
     acctacgccg cgtccgtgcc cgtggtgaag gtcggccgga tcgccgggca gtactccaag       360
     ccccgctcca agccgaccga gacccgcgac ggcgtgacgc tgccgaccta ccgcggcgac       420
     tccgtcaacg gcttcgactt caccgaggcg gcccggatcc cggaccccga gcggctcaag       480
     cgcatgtacc acgcctcggc gtccacgctg aacctggtgc gcgccttcac caccggcggc       540
     tacgccgacc tgcgccaggt gcacgcctgg aaccaggact tcgtgaagtc gtccccctcc       600
     ggccagcgct acgagcagct cgcccgggag atcgacaacg cgctgaactt catgcgggcc       660
     tgcggcacgg acccggccga gttccagacc gtcgagttct tctcctcgca cgaggcgctg       720
     ctgctcgact acgagtcggc cctcacccgc gtcgactcgc gcaccgggca gctgtacgac       780
     gtctccggcc acatggtgtg gatcggtgag cgcacccggc agctggacca cgcgcacatc       840
     gagttcgcct cgcggatccg caacccgatc ggcatcaagc tcggcccgtc caccacggcc       900
     gaggaggcgc tgcagtacat cgagcggctg gacccggagc gcgagcccgg gcggctgacc       960
     ttcatcgtcc ggatgggcgc ggacaagatc cgcgacaagc tcccggagct ggtggagaag      1020
     gtcaccgcct ccggcgccac cgtcgcctgg atcaccgacc cgatgcacgg caacacctac      1080
     gaggcggcct ccggtcacaa gacccgccgc ttcgacgacg tgctcgacga ggtcaagggc      1140
     ttcttcgagg tgcacaagtc gctcggcacc cacccgggcg gcatccacgt ggaactgacc      1200
     ggcgacgacg tcaccgagtg cgtgggcggc ggcgacgaga tcttcgtgga cgacctgcac      1260
     cagcgctacg agacggcctg cgacccgcgg ctcaaccgca gccagtcgct cgacctggcg      1320
     ttcctggtgg cggagatgta ccgggaccag tga                                   1353
//
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