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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB51217; SV 1; linear; genomic DNA; STD; PLN; 1326 BP.
XX
PA   AL096860.1
XX
DE   Arabidopsis thaliana (thale cress) putative protein
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1326
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="3"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(AL096860.1:83035..83056,
FT                   AL096860.1:83154..83244,AL096860.1:83371..83425,
FT                   AL096860.1:83488..83625,AL096860.1:83714..83832,
FT                   AL096860.1:83995..84040,AL096860.1:84343..84363,
FT                   AL096860.1:84511..84592,AL096860.1:84689..84768,
FT                   AL096860.1:84842..84928,AL096860.1:85005..85190,
FT                   AL096860.1:85272..85670))
FT                   /gene="T21L8.200"
FT                   /product="putative protein"
FT                   /note="non-consensus GC donor splice site at position
FT                   83154"
FT                   /note="EST gb:W43272 spans last two introns"
FT                   /note="similarity to br-1 protein (NITRIC OXIDE SYNTHASE) -
FT                   Helix pomatia, PID:e234055"
FT                   /note="Contains ATP/GTP-binding site motif A (P-loop)
FT                   Atp_Gtp_A [GAANVGKS]"
FT                   /note="contains EST gb:W43272, AA041025, F19926, F19927"
FT                   /db_xref="GOA:Q66GP9"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q66GP9"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAB51217.1"
FT                   /translation="MALRTLSTFPSLPRRHTTTRREPNLTVIYRNPTTSIVCKSIANSE
FT                   PPVSLSERDGFAAAAPTPGERFLENQRAHEAQKVVKKEIKKEKKKKKEEIIARKVVDTS
FT                   VSCCYGCGAPLQTSDVDSPGFVDLVTYELKKKHHQLRTMICGRCQLLSHGHMITAVGGN
FT                   GGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFNGSFLARVRDLVGANPIILVI
FT                   TKIDLLPKGTDMNCIGDWVVEVTMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGRD
FT                   VYILGAANVGKSAFINALLKTMAERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFVGGE
FT                   KLYDTPGVHLHHRQAAVVHSDDLPALAPQNRLRGQSFDVSLLYYGQISTLPTQSSSSPK
FT                   GESLNGLYRKHVSHSMDQKLLRFMQYQPKQRLPFTRKNWVCF"
XX
SQ   Sequence 1326 BP; 388 A; 278 C; 313 G; 347 T; 0 other; 2895142714 CRC32;
     atggcgctac gaacactctc aacgtttcct tctcttcctc gtcgccacac aacgacgaga        60
     cgtgaaccca atctcaccgt catttaccgt aatccgacga catcaatcgt ctgtaaatca       120
     atagctaatt cagaaccacc agtttcactc tcggaacgag atggatttgc ggcggctgct       180
     ccaacccctg gagaaaggtt cctggagaac caacgagctc atgaagctca gaaagtagtg       240
     aagaaagaga tcaaaaagga gaagaagaaa aagaaagagg agattattgc acggaaagtt       300
     gttgatacct cagtctcatg ttgttacggc tgcggagctc cgttacaaac ttccgacgtc       360
     gattctccgg gatttgtcga tttggttact tatgaattga agaagaagca tcaccagtta       420
     agaactatga tatgtggaag atgtcagcta ttgtcacatg gacatatgat tacagcagtt       480
     ggtggtaatg gaggttatcc aggtgggaaa caatttgtat cagctgatga acttcgtgag       540
     aaactttctc atttacgcca tgagaaagct ttgattgtta aattggttga tatagtggat       600
     tttaatggaa gctttttagc tcgtgttcgt gatttagttg gagctaatcc gattatactt       660
     gttataacta agattgatct tcttccaaaa ggaacggata tgaattgtat cggggattgg       720
     gttgtggaag tgaccatgag gaaaaagctt aatgtcttga gtgtccatct cacaagttca       780
     aagtccctgg atggagttag cggagttgca tcagagatcc agaaggagaa aaagggacga       840
     gatgtctaca ttctgggtgc agctaacgta gggaagtcag cattcatcaa tgctttgctg       900
     aaaacgatgg ccgaaaggga tcctgttgca gcagcggcac aaaagtacaa accaattcaa       960
     tctgctgtcc ctggaaccac cttgggtcca attcagatca acgctttcgt cggaggagag      1020
     aagttgtatg acacaccggg tgtgcaccta caccacaggc aagcagctgt cgttcattca      1080
     gatgatttac ccgcccttgc tcctcaaaat cgtctcagag gccaatcttt cgatgtaagt      1140
     ctgctttatt acggccagat ttcaactttg ccaactcaat cgtcaagtag tcccaagggt      1200
     gagagcttaa acgggctcta ccggaaacat gtttcacatt ctatggacca aaagctcttg      1260
     agattcatgc agtaccaacc aaaacagcga ctgcctttta cgagaaagaa ctgggtgtgc      1320
     ttctaa                                                                 1326
//
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