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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB50930; SV 1; linear; genomic DNA; STD; PRO; 1326 BP.
XX
PA   AL939110.1
XX
DE   Streptomyces coelicolor putative homogentisate 1,2-dioxygenase
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1326
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             AL939110.1:16834..18159
FT                   /transl_table=11
FT                   /gene="SCO1715"
FT                   /gene_synonym="SCI11.04"
FT                   /gene_synonym="hgd"
FT                   /product="putative homogentisate 1,2-dioxygenase"
FT                   /note="SCI11.04, hgd, probable homogentisate
FT                   1,2-dioxygenase, len: 441 aa; highly similar to eukaryotic
FT                   homogentisate 1,2-dioxygenases e.g. SW:HGD_HUMAN
FT                   (EMBL:U63008), hgd, Homo sapiens homogentisate
FT                   1,2-dioxygenase (445 aa), fasta scores; opt: 1551 z-score:
FT                   1809.0 E(): 0, 52.1% identity in 436 aa overlap"
FT                   /db_xref="GOA:Q9S2B5"
FT                   /db_xref="HSSP:1EYB"
FT                   /db_xref="InterPro:IPR005708"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9S2B5"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAB50930.1"
FT                   /translation="MSGDARKTAEGLAYLSGFGNEHASEAVAGALPEGRNSPQRAPLGL
FT                   YAEQLSGTAFTEPRAHNRRSWLYRIRPSAAHPAFTRSGNGTIRTAPFNQAVPDPNRLRW
FT                   NPLPVPGPATDFVEGLWTLGGNGDATQRTGMAVHLYHATASMDRVFSDADGELLIVPER
FT                   GGLLLRTEFGLLHAEPGHVALIPRGVRFRVQLLDEDARGYVCENYGAPFQLPDLGPIGA
FT                   NGLANARDFRAPVAAYEDDESTPGPVEVVNKFCGNLWTAEYDHSPLDVVAWHGNHVPYV
FT                   YDLRRFNVIGSISYDHPDPSIFTVLTSPSDTPGLAGVDFVVFAPRWLVGEDTFRPPYFH
FT                   RNVMSEYMGLIEGAYDAKAEGFVPGGGSLHNMMSAHGPDRETFDRASAAELKPQRIDDG
FT                   LAFMFETRWPVTLTPQAARAEHLQPGYDDVWQGLERHFRPLH"
XX
SQ   Sequence 1326 BP; 193 A; 485 C; 469 G; 179 T; 0 other; 3163650270 CRC32;
     atgagcgggg acgcgcggaa gaccgcggag gggctggcct atctgtccgg tttcggcaac        60
     gagcacgcct cggaggccgt ggcgggcgcg ctgcccgagg gccggaactc gccgcagcgg       120
     gcgccgttgg gcctgtacgc ggagcagctg agcggcacgg cgttcacgga gccgagggcg       180
     cacaaccggc ggtcgtggct gtaccggatc cgcccgtcgg ccgcacaccc cgcgttcacc       240
     cgttcgggca acggcacgat ccgcaccgcg cccttcaacc aggccgtgcc ggacccgaac       300
     cggctgcgct ggaacccgct gccggtgccc gggcccgcca cggacttcgt cgaggggctg       360
     tggacgctcg gcggcaacgg cgacgcgacg cagcgcaccg gcatggccgt gcacctgtac       420
     cacgccaccg cgtccatgga ccgcgtcttc agcgacgcgg acggcgagct gctgatcgtc       480
     ccggagcgcg gcggcctgct gctgcgcacc gagttcgggc tgctgcacgc cgagccggga       540
     cacgtggcgc tgatcccgcg cggggtccgc ttccgcgtcc agctgctgga cgaggacgcc       600
     cgcggctacg tctgcgagaa ctacggcgcg ccgttccagc tccccgacct gggcccgatc       660
     ggcgccaacg gcctggccaa cgcccgggac ttccgcgcgc cggtcgccgc gtacgaggac       720
     gacgagagca cgccgggccc ggtggaggtg gtcaacaagt tctgcggcaa cctctggacg       780
     gccgagtacg accactcccc gctggacgtc gtcgcctggc acggcaacca cgtgccctac       840
     gtctacgacc tgcgccgctt caacgtcatc ggctccatct cgtacgacca cccggacccg       900
     tcgatcttca cggtgctcac ctccccgtcg gacacgccgg gactggcggg tgtggacttc       960
     gtggtgttcg cgccgcgctg gctggtgggc gaggacacct tccggccgcc gtacttccac      1020
     cggaacgtga tgagcgagta catgggcctg atcgagggcg cctacgacgc gaaggcggaa      1080
     ggcttcgtgc cgggcggcgg ttcgctgcac aacatgatgt cggcgcacgg cccggaccgg      1140
     gagaccttcg accgggcgag cgccgccgag ctgaagccgc agcggatcga cgacggactg      1200
     gcgttcatgt tcgagacacg gtggccggtg accctcactc cccaggcggc ccgcgccgag      1260
     cacctgcaac cgggctacga cgacgtctgg cagggcctgg agcggcactt ccgccccttg      1320
     cactga                                                                 1326
//
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