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EBI DbfetchID CAB45032; SV 1; linear; genomic DNA; STD; PRO; 2964 BP. XX PA AL078635.1 XX DE Amycolatopsis orientalis putative large multi-functional protein XX OS Amycolatopsis orientalis OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Pseudonocardineae; Pseudonocardiaceae; Amycolatopsis. OX NCBI_TaxID=31958; XX FH Key Location/Qualifiers FH FT source 1..2964 FT /organism="Amycolatopsis orientalis" FT /strain="A3(2)" FT /mol_type="genomic DNA" FT /clone="cosmid pCZA382" FT CDS AL078635.1:8493..11456 FT /transl_table=11 FT /gene="CZA382.11" FT /product="putative large multi-functional protein" FT /label=CZA382.11 FT /note="CZA382.11, possible large multi-functional protein, FT len: 987aa; contains 3 regions with weak similarity to FT different groups of proteins eg. 660-815aa similar to FT SW:CTA1_BACCI cycloisomaltooligosaccharide FT glucanotransferase (972 aa) fasta scores; opt: 287, FT z-score: 307.4, E(): 8.6e-10, (35.9% identity in 156 aa FT overlap), 225-490aa similar to SW:SNDH_ACELI L-sorbosone FT dehydrogenase (449 aa) fasta scores; opt: 156, z-score: FT 170.1, E(): 0.038, (22.2% identity in 302 aa overlap) and FT 120-230aa similar to SW:GSPB_ERWCH general secretion FT pathway protein B from Erwinia chrysanthemi (220 aa) fasta FT scores; opt: 116, z-score: 131.3, E(): 5.6, (26.4% identity FT in 125 aa overlap). Contains hydrophobic N-terminus." FT /db_xref="GOA:Q9XBE0" FT /db_xref="InterPro:IPR011658" FT /db_xref="UniProtKB/TrEMBL:Q9XBE0" FT /protein_id="CAB45032.1" FT /translation="MPPVAALLAAVIAVPLLPVPASAQPAIPPQEPGVTMRVFDVQVPL FT NDYCKLKPGQTPNVDKLMPAIDWSSNADFGIADRFVTEVSAYLHVSTAGTYDFRLTSDD FT GARFLLDGTQVIDHPGRHGATAKDGSAQLAAGHHALRIDHFDADFDQRLKLEWRPPGAA FT EYTVVPNSALSTDADVVRVTSPGRKQCEGVTDAPGDGLPLTDVHPAYTLTNLRPNGFEP FT QVTGMDWLPDGRLAISTWGGDRLTVLGEVFLLDGVTGNTDPSKVSIKRIAHGLREPMGL FT KYVDGTVYVSEKHQLTALVDKTGDEVADEYRRIATWPFGGNYHEFAFGLLYKDGYFYVT FT TGIAMVPGGATADPQPVPNRGSTLKIDKNTGDVSYVAGGLRTPNGLGWGPEGDAFVTDN FT QGMWVPASKLVRIKHRAFYNHYTNPGGPFDDQPVTEPVLWLPHNEISNSPSNPIVLPDG FT VFKDQMVFGDVTYGGLQRAYLEKVGGEYQGAVFRMTQGLESGVSRISVGPDGAIYTGGI FT GWAGNWGQEGKLKYGLQKLSLNGANAFDIHSMRAIKGGFELEYTQPLSDETAKDLAAKY FT KAQQWRYVATPQYGGPKVDEETLGVTSATLSTDRKKVTLQIAGLKPGRVVYLRSPRPFN FT SASGAELWSTEAWYTLNRLPDGTVAPQEYEAESARLTGGTGWNTNHAGYSGAGFVDRNW FT EPGSTTTFAVRPARAGRHNIALRYANGPNPSPNPVSKSMSLYVNGKKEKQIWLAATGSW FT SKWATHVETVTLRPGANTISYVYEPTDTGHVNLDKITLSMTNRVTLFNGTNLDAWETTS FT GAPATWPVADGSMESFGGDIRTKERFGDFRMHVEWYEPDYPPEVTGQARGNSGVYIYES FT YELQVLESHGRPPELNGAGAIYLKKAPDVNAATPTGTWQTYDIEFRAARFDAAGKKVEN FT ARITVWWNGKLVHNNVAIDGPTGAGKPEDPAPGHIKLQDHGDPGANPRFRNIWIERR" XX SQ Sequence 2964 BP; 572 A; 1009 C; 959 G; 424 T; 0 other; 1017012777 CRC32; atgccgccag tcgctgccct gcttgccgct gtcatcgcag tgcccttact ccccgtcccg 60 gcgtccgccc agcctgccat cccgccccaa gaaccgggcg tgaccatgcg cgtattcgac 120 gtgcaggtgc cgctcaacga ctactgcaag ctcaaaccgg gccagacgcc caatgtcgac 180 aagctgatgc cggcaatcga ctggtcaagc aacgcggact tcgggatcgc tgatcgtttt 240 gtcaccgaag taagcgctta ccttcacgtg tccacggccg gaacctacga cttccggctc 300 acgagcgacg atggtgcacg gttcctgctc gacggcactc aggtgatcga ccaccccggc 360 cgtcacggcg ccaccgcgaa agacggttcg gcccaactgg ccgcgggcca ccacgcactg 420 cgcatcgacc acttcgacgc cgacttcgac caacggctca agctcgagtg gcgcccaccg 480 ggcgcggccg aatacaccgt cgtgccgaac tcggcgctga gcaccgacgc cgacgtcgtg 540 cgtgtcacct cgcccggtcg caagcagtgc gagggcgtca cggacgctcc cggcgatggt 600 ctgccgttga ccgatgtgca cccggcctac acgctgacga acttgcgtcc caacgggttc 660 gagccgcagg tcaccgggat ggactggctg ccggacggcc ggctggccat ctccacctgg 720 ggcggcgacc ggctgaccgt gctcggtgag gtgttcctgc tcgatggcgt caccggcaac 780 accgacccgt ccaaggtgag catcaagcgg atcgcccacg gcctgcggga accgatggga 840 ctcaagtacg tcgacggcac cgtctacgtg tccgagaagc accagttgac cgcgctcgtc 900 gacaagaccg gtgacgaggt cgccgacgag taccgcagga tcgcgacctg gccgttcggc 960 ggcaactacc acgagttcgc gttcggcctg ctgtacaagg acgggtactt ctacgtcacc 1020 acgggcatcg cgatggtccc cggtggcgcg accgccgacc cgcagcccgt gcccaaccgg 1080 ggcagcactc tcaagatcga caagaacacc ggcgatgtgt cctatgtggc cggtgggctg 1140 cgcacaccca acggcctggg ctgggggcct gagggcgacg ccttcgtcac cgacaaccag 1200 ggcatgtggg tgccggcgtc gaagctggta cggatcaagc accgcgcttt ctacaaccac 1260 tacaccaacc cgggcggccc gttcgacgac cagccggtga ccgaacccgt gctttggttg 1320 ccgcacaatg agatctccaa ctcgccgagc aacccgatcg tcctgcccga cggtgtgttc 1380 aaggaccaga tggtgttcgg tgacgtgacc tacggcggcc tgcaacgcgc gtacctggag 1440 aaggtcggcg gcgagtacca gggtgctgtt ttccgtatga cacaagggct tgagtccggg 1500 gtgagccgga tcagtgtcgg gccggacggc gcgatctaca ccggcggcat cggctgggca 1560 ggcaactggg gccaggaagg caaactcaag tacggcctgc agaagctcag tctcaacggt 1620 gccaacgcct ttgacatcca cagcatgcgg gccatcaagg gcggcttcga actggagtac 1680 acgcagccgc tgtccgacga gaccgcgaaa gacctcgccg cgaagtacaa ggctcagcag 1740 tggcggtacg tggcaacgcc ccagtacggc gggccgaagg tcgacgagga gaccctcggc 1800 gtcacctcgg cgacgctgtc gaccgaccgc aagaaggtga cgctgcagat cgcgggcttg 1860 aagccgggcc gcgtggttta cctgcgctcg ccgcgcccgt tcaactcggc gtccggtgcg 1920 gaactgtgga gcaccgaggc gtggtacacc ctcaaccggc tgcccgatgg cacggtggcg 1980 ccacaggagt acgaagcgga gtccgccagg ttgaccggcg ggaccggctg gaacaccaac 2040 cacgccggct attcgggcgc cggtttcgtc gaccgcaact gggagccggg cagcaccacc 2100 acgttcgccg tccgccccgc gcgagccggt cggcacaaca tcgccctgcg gtacgcgaac 2160 ggcccgaacc cgagccccaa cccggtctcg aagtcgatga gcctgtacgt caacggcaag 2220 aaggagaaac agatctggct ggccgccacc gggagctgga gcaagtgggc gacacacgtg 2280 gagacggtga cgctgcgccc tggcgcgaac accatctcct acgtctacga accgactgac 2340 accggacacg tgaacctgga caagatcacg ctgtcgatga ccaaccgggt cacgttgttc 2400 aacggcacca accttgacgc gtgggagacg acgtccggcg ccccggcgac gtggcccgtc 2460 gcggacgggt cgatggagtc gttcggcggt gacatccgta cgaaggaacg gttcggcgac 2520 ttccgcatgc acgtcgagtg gtacgagccg gactacccgc cggaggtcac cgggcaagcc 2580 cgcggcaaca gcggcgtgta catctacgag agctacgaac tacaggtgct ggagtcccac 2640 gggcggcctc cggagctcaa cggcgccggc gccatctatc tgaagaaggc gcccgacgtg 2700 aacgcggcga cgccgaccgg cacgtggcag acgtacgaca tcgagttccg tgccgcgcgc 2760 ttcgacgcgg cgggcaagaa ggtggagaac gcgcggataa ccgtgtggtg gaacggaaag 2820 ctggtgcaca acaacgtcgc catcgacggc ccgaccggcg cgggcaaacc ggaagacccg 2880 gcccctggcc acatcaagct gcaggaccac ggcgatcccg gcgccaaccc gcgattccgc 2940 aacatctgga tcgaacgccg ctga 2964 // |
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