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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB44533; SV 1; linear; genomic DNA; STD; PRO; 627 BP.
XX
PA   AL939120.1
XX
DE   Streptomyces coelicolor putative polypetide deformylase
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..627
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL939120.1:148419..149045)
FT                   /transl_table=11
FT                   /gene="SCO4560"
FT                   /gene_synonym="SCD16A.23"
FT                   /product="putative polypetide deformylase"
FT                   /note="SCD16A.23, possible polypetide deformylase, len:
FT                   208aa; similar to many eg. TR:P96275 (EMBL:Z84724)
FT                   hypothetical protein from Mycobacterium tuberculosis (197
FT                   aa) fasta scores; opt: 425, z-score: 513.1, E(): 3e-21,
FT                   (48.0% identity in 171 aa overlap) and SW:DEF_ECOLI
FT                   polypetide deformylase from Escherichia coli (168 aa) fasta
FT                   scores; opt: 373, z-score: 452.6, E(): 7e-18, (35.6%
FT                   identity in 174 aa overlap). Contains Pfam match to entry
FT                   PF01327 Pep_deformylase, Polypeptide deformylase."
FT                   /db_xref="GOA:Q9XAQ2"
FT                   /db_xref="HSSP:1DEF"
FT                   /db_xref="InterPro:IPR000181"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9XAQ2"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAB44533.1"
FT                   /translation="MPSVFVQGRPTASYPPFAPEAGRGAVRRVTEVGEEVLHRPCRDVT
FT                   EFGPDLAALIDDMFRTMYVAEGAGLAANQVGVDLRLFVYDCPDDEGVRHVGHLVNPVLD
FT                   ALDPAARRLLDEGEGCLSVPGAVMAVPRPDRAVVRGLDKDGVPLLVEGTGYFARCLAHE
FT                   TDHVNGHVYLDRLSGRERKAALRQSADRREEVFARRAANAAAFAA"
XX
SQ   Sequence 627 BP; 77 A; 234 C; 232 G; 84 T; 0 other; 3778255824 CRC32;
     atgccgagtg tcttcgtcca ggggcggccc accgcctcct accccccgtt cgcgcccgag        60
     gcagggcgcg gagcggtgcg gcgcgtcacc gaggtcggcg aggaggtgct gcaccggccg       120
     tgccgggacg tcaccgagtt cggacccgac ctcgccgcgc tgatcgacga catgttccgc       180
     accatgtacg tcgcggaggg ggccggactg gcggccaatc aggtcggggt ggacctgcgc       240
     ctgttcgtct acgactgccc ggacgacgag ggtgtccgac atgtcggaca cctcgtcaat       300
     cccgtcctcg acgccctcga cccggccgcg cgccggctgc tcgacgaggg cgaggggtgc       360
     ctgtccgtgc cgggcgccgt catggccgta ccgcggcccg accgggccgt cgtgcgcggc       420
     ctggacaagg acggcgtgcc gctcctcgtc gagggcaccg gctacttcgc gcgctgcctc       480
     gcccacgaga ccgaccacgt gaacgggcac gtctacctgg accggctctc cggccgggag       540
     cggaaggcgg cgctgcggca gtcggcggac cggcgcgagg aggtcttcgc gcgccgggcc       600
     gccaacgccg cggccttcgc cgcctga                                           627
//
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