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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB38890; SV 1; linear; genomic DNA; STD; PRO; 993 BP.
XX
PA   AL939115.1
XX
DE   Streptomyces coelicolor putative 3-oxoacyl-[acyl carrier protein] synthase
DE   III
XX
OS   Streptomyces coelicolor
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Streptomycineae; Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1902;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..993
FT                   /organism="Streptomyces coelicolor"
FT                   /strain="A3(2)"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(AL939115.1:249817..250809)
FT                   /transl_table=11
FT                   /gene="SCO3246"
FT                   /gene_synonym="SCE29.15c"
FT                   /gene_synonym="fabH4"
FT                   /product="putative 3-oxoacyl-[acyl carrier protein]
FT                   synthase III"
FT                   /note="SCE29.15c, fabH4, probable 3-oxoacyl-[acyl carrier
FT                   protein] synthase III, len: aa; similar to many eg.
FT                   SW:FABH_ECOLI 3-oxoacyl-[acyl carrier protein] synthase
FT                   III, FabH, from Escherichia coli (317 aa) fasta scores;
FT                   opt: 765, z-score: 862.6, E(): 0, (40.8% identity in 314 aa
FT                   overlap). Also similar to two from Streptomyces coelicolor
FT                   - TR:O54151 (EMBL:AL021409) (335 aa) fasta scores; opt:
FT                   694, z-score: 782.9, E(): 0, (53.5% identity in 331 aa
FT                   overlap) and TR:E1359140 (EMBL:AL034443) (316 aa) fasta
FT                   scores; opt: 685, z-score: 773.2, E(): 0, (40.6% identity
FT                   in 313 aa overlap)."
FT                   /db_xref="GOA:Q9Z4Y5"
FT                   /db_xref="HSSP:1HNK"
FT                   /db_xref="InterPro:IPR016038"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9Z4Y5"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAB38890.1"
FT                   /translation="MSAARGGRAGAVVTGVGTCLPETVVDNDEVSRHLDTDHAWIHSRT
FT                   GIERRRRVSPGTTTGDLAVTAGAAALKSAGRDDCDLVLLATTTPDRRCPATAPRVASRL
FT                   GLRAAAAFDLSAVCSGFVYGLSVASAMITAGTCDRALVIGADVYSSIVDPDDRGTAVVF
FT                   GDGAGAVLLERGDTGDPGAVLHTELGSDGTGDELITIPPDGAYLTMRGSDVYTRAVTTM
FT                   AESARSTAAHAGWDLADVDAFVGHQANLRILTSVAKRLRLPPERVVSNIADVANTAAAS
FT                   IPLALADAAAQGRIGSGDRLLLTAFGGGLTWGSAAVVWSGAEPVQDQRS"
XX
SQ   Sequence 993 BP; 117 A; 395 C; 359 G; 122 T; 0 other; 2943542033 CRC32;
     gtgagcgccg cgcgcggcgg tcgggccggg gccgtcgtca ccggggtggg cacctgtctg        60
     ccggagaccg tggtcgacaa cgacgaggtg tcgcggcacc tggacaccga ccacgcctgg       120
     atccacagcc gtaccggcat cgagcgccgg cgccgggtgt cgcccgggac caccacgggg       180
     gacctcgccg tcaccgccgg ggccgccgcg ctgaagtccg ccggacggga cgactgcgac       240
     ctcgtcctcc tcgccaccac cacaccggac cggcgctgcc ccgccaccgc gccccgggtg       300
     gcgtcccggc tcgggctgcg ggccgccgcc gcgttcgacc tgtccgccgt gtgctccggc       360
     ttcgtgtacg ggctgtccgt ggccagcgcg atgatcaccg cgggcacctg cgaccgggcc       420
     ctggtcatcg gcgcggacgt ctactcctcg atcgtggacc ccgacgaccg gggcaccgcc       480
     gtcgtcttcg gcgacggcgc gggcgccgtg ctcctggagc gcggcgacac cggcgacccg       540
     ggcgccgtgc tgcacaccga gctcggcagc gacggcaccg gcgacgagct gatcaccatc       600
     ccgccggacg gcgcgtacct caccatgcgc ggcagcgacg tctacacccg tgccgtgacc       660
     accatggcgg agtcggcgcg ttccaccgcc gcgcacgcgg gctgggacct ggcggacgtg       720
     gacgccttcg tcgggcacca ggcgaacctc cgcatcctca cctcggtggc gaagcggctg       780
     cggctgcccc cggagcgggt ggtgtcgaac atcgcggacg tggccaacac cgccgccgcg       840
     tccatccccc tcgcgctggc cgacgcggcc gcgcagggcc gtatcggctc cggggaccgc       900
     ctgctcctga ccgccttcgg cggcgggctg acctggggct ccgccgccgt cgtctggtcg       960
     ggcgcggaac ccgtccagga ccagcggagc tga                                    993
//
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