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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB37480; SV 1; linear; genomic DNA; STD; PLN; 1362 BP.
XX
PA   AL035539.1
XX
DE   Arabidopsis thaliana (thale cress) partial glycosyltransferase like protein
DE   (fragment)
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1362
FT                   /organism="Arabidopsis thaliana"
FT                   /chromosome="4"
FT                   /variety="Columbia"
FT                   /mol_type="genomic DNA"
FT   CDS             complement(join(AL035539.1:<2..106,AL035539.1:191..361,
FT                   AL035539.1:569..637,AL035539.1:868..940,
FT                   AL035539.1:1089..1167,AL035539.1:1269..1330,
FT                   AL035539.1:1436..1526,AL035539.1:1620..1857,
FT                   AL035539.1:1901..1963,AL035539.1:2056..2101,
FT                   AL035539.1:2179..2255,AL035539.1:2449..2528,
FT                   AL035539.1:2669..2756,AL035539.1:2970..3020,
FT                   AL035539.1:3125..3193))
FT                   /gene="F22I13.10"
FT                   /product="glycosyltransferase like protein (fragment)"
FT                   /note="protein is uncomplete because of BAC end; 3AS and
FT                   stop codon are missing"
FT                   /note="similarity to alpha-1, 3-mannosyl-glycoprotein
FT                   beta-1, 2-N-acetylglucosaminyltransferase (EC 2.4.1.101) I
FT                   - rat, PIR2:JC2076"
FT                   /db_xref="GOA:Q9XGM8"
FT                   /db_xref="HSSP:1FO8"
FT                   /db_xref="InterPro:IPR004139"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9XGM8"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAB37480.1"
FT                   /translation="MARISCDLRFLLIPAAFMFIYIQMRLFQTQSQYADRLSSAIESEN
FT                   HCTSQMRGLIDEVSIKQSRIVALEDMKNRQDEELVQLKDLIQTFESALLSPMPVAAVVV
FT                   MACSRADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSYNQLTYMQINEDE
FT                   GSFSPFQHLDFEPVVTERPGELTAYYKIARKDWFLFSLRPSSSITETLFNTGHYKWALD
FT                   QLFYKHKFSRVIILEGYLVSLTDDMEIAPDFFDYFEAAASLMDRDKTIMAASSWNDNGQ
FT                   KQFVHDPYALYRSDFFPGLGWMLKRSTWDELSPKLKENHKGRQFIRPEVCRTYNFGEHG
FT                   SSLGQFFSQYLEPIKLNDVTVSGNYTKYFSGLVRQARPIQGSDLVLKAQNIKDDVRIRY
FT                   KDQVEFERIAGEFGIFEEWKDGVPRTAYKGVVVFRIQTTRRVFLVGPDSVMQLGI"
XX
SQ   Sequence 1362 BP; 388 A; 274 C; 309 G; 391 T; 0 other; 1947725918 CRC32;
     atggcgagga tctcgtgtga cttgagattt cttctcatcc cggcagcttt catgttcatc        60
     tacatccaga tgaggctttt ccagacgcaa tcacagtatg cagatcgcct cagttccgct       120
     atcgaatctg agaaccattg cactagtcaa atgcgaggcc tcatagatga agttagcatc       180
     aaacagtcgc ggattgttgc cctcgaagat atgaagaacc gccaggacga agaacttgtg       240
     cagcttaagg atctaatcca gacgtttgaa agtgccttac tatcacctat gcctgtggct       300
     gctgtagtgg ttatggcctg cagtcgtgca gactatcttg aaaggactgt taaatcagtt       360
     ttaacatatc aaactcccgt tgcttcaaaa tatcctctat ttatatctca ggatggatct       420
     gatcaagctg tcaagagcaa gtcattgagc tataatcaat taacatatat gcagataaat       480
     gaggatgaag gctcgttttc cccttttcag cacttggatt ttgaaccagt ggtcactgaa       540
     aggcctggcg aactgactgc gtactacaag attgcacgta aggactggtt tctcttttct       600
     ctgcgtccct ccagctccat tactgaaaca ctttttaata caggtcacta caagtgggca       660
     ctggaccagt tgttttacaa acacaaattt agtcgagtga ttatactaga aggttatctt       720
     gtctctttaa cagatgatat ggaaattgct ccagacttct ttgattactt tgaggctgca       780
     gctagtctca tggataggga taaaaccatt atggctgctt catcatggaa tgataatgga       840
     cagaagcagt ttgtgcatga tccctatgcg ctataccgat cagatttttt tcctggcctt       900
     gggtggatgc tcaagagatc gacttgggat gagttatcac caaaactaaa ggaaaaccat       960
     aaaggccgcc aattcattcg accggaagtc tgtagaacat acaattttgg tgaacatggg      1020
     tctagtttgg gacagttttt cagtcagtat ctggaaccta taaagctaaa cgatgtgacg      1080
     gtaagcggaa actataccaa gtacttttct ggcttagtga gacaagcacg accaattcaa      1140
     ggttctgacc ttgtcttaaa ggctcaaaac ataaaggatg atgttcgtat ccggtataaa      1200
     gaccaagtag agtttgaacg cattgcaggg gaatttggta tatttgaaga atggaaggat      1260
     ggtgtgcctc gaacagcata taaaggagta gtggtgtttc gaatccagac aacaagacgt      1320
     gtattcctgg ttgggccaga ttctgtaatg cagcttggaa tt                         1362
//
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