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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB13485; SV 1; linear; genomic DNA; STD; PRO; 2076 BP.
XX
PA   AL009126.3
XX
DE   Bacillus subtilis subsp. subtilis str. 168 DNA topoisomerase I
XX
OS   Bacillus subtilis subsp. subtilis str. 168
OC   Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2076
FT                   /organism="Bacillus subtilis subsp. subtilis str. 168"
FT                   /strain="168"
FT                   /mol_type="genomic DNA"
FT   CDS             AL009126.3:1683661..1685736
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="topA"
FT                   /locus_tag="BSU16120"
FT                   /product="DNA topoisomerase I"
FT                   /function="16.6: Maintain"
FT                   /function="16.9: Replicate"
FT                   /function="16.2: Construct biomass (Anabolism)"
FT                   /function="16.3: Control"
FT                   /EC_number="5.99.1.2"
FT                   /note="Evidence 1a: Function experimentally demonstrated in
FT                   the studied strain; PubMedId: 12682299, 16585761, 9580687;
FT                   Product type e: enzyme"
FT                   /db_xref="GOA:P39814"
FT                   /db_xref="HSSP:1ECL"
FT                   /db_xref="InterPro:IPR003602"
FT                   /db_xref="SubtiList:BG11007"
FT                   /db_xref="UniProtKB/Swiss-Prot:P39814"
FT                   /inference="ab initio prediction:AMIGene:2.0"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAB13485.1"
FT                   /translation="MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVD
FT                   IEQNFEPKYITIRGKGPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLNS
FT                   DCRVVFNEITKDAIKESFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLS
FT                   AGRVQSVALRLIIDREKEINDFKPEEYWTIDGTFLKGQETFEASFFGKNGKKLPLNSEA
FT                   DVKEILSQLKGNQYTVEKVTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQL
FT                   YEGIDLGREGTVGLITYMRTDSTRISNTAVDEAAAFIDQTYGKEFLGGKRKPAKKNENA
FT                   QDAHEAIRPTSVLRKPSELKAVLGRDQMRLYKLIWERFVASQMAPAVLDTMSVDLTNNG
FT                   LTFRANGSKVKFSGFMKVYVEGKDDQMEEKDRMLPDLQEGDTVLSKDIEPEQHFTQPPP
FT                   RYTEARLVKTLEERGIGRPSTYAPTLDTIQRRGYVALDNKRFVPTELGQIVLDLIMEFF
FT                   PEIINVEFTAKMERDLDHVEEGNTEWVKIIDNFYTDFEKRVKKAESEMKEVEIEPEYAG
FT                   EDCELCSSPMVYKMGRYGKFLACSNFPDCRNTKPIVKQIGVKCPSCGEGNIVERKSKKK
FT                   RVFYGCDRYPDCEFVSWDKPIERKCPKCGKMLVEKKLKKGIQVQCVECDYKEEPQK"
XX
SQ   Sequence 2076 BP; 700 A; 388 C; 497 G; 491 T; 0 other; 2761608565 CRC32;
     atgtctgatt atctagtcat cgtggaatcg cccgctaagg cgaaaacgat tgaacgttac        60
     ttaggtaaaa aatataaagt aaaagcatca atgggacatg tccgggatct tccaaaaagt       120
     caaatgggag ttgacataga acagaatttt gaaccgaaat atattaccat tcgaggtaaa       180
     ggcccggtat taaaagagct gaaaacggct gcgaaaaaag ccaaaaaagt gtatctcgca       240
     gctgaccccg acagagaagg ggaagcgatt gcatggcatt tggcacacag tcttgattta       300
     gatctcaact cagactgccg tgtggtgttt aacgaaatta caaaagacgc tattaaggaa       360
     tcgtttaagc atccccgcat gatcaatatg gatttagtgg atgcacagca agcgagacgt       420
     attttagaca ggcttgtcgg atataaaatc agtccaatct tatggaaaaa agtcaaaaaa       480
     gggcttagcg caggacgcgt gcaatccgtt gccctccgtt tgattattga ccgtgaaaaa       540
     gagattaacg actttaagcc tgaggaatat tggacaattg acggtacgtt cttaaaaggt       600
     caagaaacct ttgaagcgag ctttttcggg aaaaacggca aaaaacttcc tttaaatagt       660
     gaagctgatg taaaagagat tctttctcag ctcaaaggga atcaatatac agttgaaaaa       720
     gtaaccaaaa aggaacgcaa acgtaatcct gctttgcctt ttaccacttc taccctgcag       780
     caggaagcgg ctcgcaagct caatttcaga gcgaagaaaa cgatgatgat tgcacagcaa       840
     ttatatgaag gaattgattt aggaagagaa ggaacggttg gtctgatcac gtatatgaga       900
     acggattcaa cccgtatttc aaatacggct gttgatgaag cagctgcatt tattgatcag       960
     acatatggaa aagagttcct aggcggaaaa cggaagcctg cgaaaaagaa tgaaaatgcc      1020
     caggatgccc acgaagcaat tcggccgaca tcagttctta gaaaaccaag tgaattaaaa      1080
     gcagtcctcg gcagagacca aatgagactg tataaattaa tttgggagcg ttttgttgcc      1140
     agccaaatgg caccggctgt tctcgataca atgagtgtcg acctgacaaa caacggtttg      1200
     acatttcgtg caaatggaag taaagtcaag ttttccgggt ttatgaaggt gtatgttgaa      1260
     ggaaaagacg atcaaatgga agaaaaagac cggatgctgc ctgacttaca agaaggcgac      1320
     acggtattat caaaagatat agaacctgag cagcatttta cccagccgcc tccgcgatat      1380
     actgaggccc ggcttgttaa aacccttgaa gaacgcggta tcggccgtcc atccacatat      1440
     gctccgacac ttgatactat tcagcggcgc ggctacgtgg cattggataa taaacgtttc      1500
     gttccgactg aattaggtca gatcgttctt gacttgatca tggagttttt ccctgagatc      1560
     attaacgttg agtttacagc taaaatggag agagatcttg atcatgttga agaaggaaat      1620
     accgaatggg tcaagattat cgataatttc tacaccgatt ttgaaaaacg cgtcaaaaaa      1680
     gccgaatcgg aaatgaagga agttgagatt gaaccagagt atgctggaga ggattgtgaa      1740
     ttgtgcagtt ctccaatggt atataaaatg ggacggtacg gtaaattctt agcttgctcc      1800
     aacttccctg actgccggaa cacgaaaccg attgtgaaac aaatcggtgt gaagtgcccg      1860
     agctgcggag aaggaaacat tgttgagcga aaatcgaaaa agaaacgggt gttttacggc      1920
     tgtgaccgtt atccggactg tgaattcgta tcatgggaca aaccaattga acgaaaatgc      1980
     ccgaaatgcg gaaaaatgct cgtcgagaaa aaactcaaaa aaggtataca agtccaatgc      2040
     gtggaatgcg attataagga agaaccacag aagtag                                2076
//
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