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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB07427; SV 3; linear; genomic DNA; STD; INV; 1572 BP.
XX
PA   Z92849.1
XX
DE   Caenorhabditis elegans C. elegans protein H12D21.10a, partially confirmed
DE   by transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1572
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="V"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="H12D21"
FT   CDS             join(Z92849.1:18009..18167,Z92849.1:18215..18315,
FT                   Z92849.1:18362..18452,Z92849.1:18533..18738,
FT                   Z92849.1:18785..18995,Z92849.1:19045..19129,
FT                   Z92849.1:19178..19319,Z92849.1:19488..19584,
FT                   Z92849.1:29108..29166,Z92849.1:29217..29336,
FT                   Z92849.1:29380..29461,Z92849.1:29675..29788,
FT                   Z92849.1:29852..29956)
FT                   /locus_tag="H12D21.10a"
FT                   /standard_name="H12D21.10a"
FT                   /product="C. elegans protein H12D21.10a, partially
FT                   confirmed by transcript evidence"
FT                   /note="contains similarity to Pfam domain PF04577 Protein
FT                   of unknown function (DUF563) contains similarity to
FT                   Interpro domain IPR007657 (Glycosyltransferase AER61,
FT                   uncharacterised)"
FT                   /db_xref="GOA:Q9XTX0"
FT                   /db_xref="InterPro:IPR007657"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XTX0"
FT                   /db_xref="WormBase:WBGene00010386"
FT                   /protein_id="CAB07427.3"
FT                   /translation="MWRTFFLILNFIFYCDSSWIKDLNLPRQLLEYHISSNPKFRQKCI
FT                   EDEKCSINLNTTRCFGFEPDCDKINSLRTRSKFTSCEQNLNPKVADLFFKQGDFGYLES
FT                   RLVKHDICTSDHVSLSTLSCSDDLTHCVGTNIFFDFSNLNIKTSTRYRQDVIQAGRVGG
FT                   KCSNFDEKVLKQNSNVKGYLMSWADELQNFRSSSNFQMDHDHCDIIFEKPTIIMKLDAA
FT                   VNLYHHFCDFFNLYASLHLNQTFDQDVDIILWDTHPGGYNDHYYGVTWKAFSKNQPFEL
FT                   KEFDQKKVCFKRVMMPLLARQRTGLFYNSPVVEGCSGSKMFRTFSQFILHRLGIRQPKA
FT                   DLEKARIVILSRSTAFRKILNIKEILRSLGHLPNVSTRVVDYNERIPFEKQLNITSKTD
FT                   IFIGMHGAGLTHLLFLPDWAAVFEIYNCGDPGCYSDLARLRGVKYYTWPEAKINLIRSD
FT                   EEGKHPQSGEKHLKFANYHVDPIEFREQVRKMVDHVRAHPKFINSRRAQKRKQEERMAE
FT                   QNKKEL"
XX
SQ   Sequence 1572 BP; 529 A; 277 C; 302 G; 464 T; 0 other; 3841742094 CRC32;
     atgtggcgga ctttcttttt aattttaaat ttcatttttt attgtgactc ttcatggatc        60
     aaagatttga atctacctcg acaattacta gaatatcata tttcatcaaa ccctaaattt       120
     cgccaaaaat gcattgaaga tgaaaagtgt tcaattaatc ttaacactac caggtgcttt       180
     ggctttgagc cagactgtga taaaattaat tctttgagga ccagaagtaa atttacaagt       240
     tgtgagcaga atctgaatcc aaaagttgct gacctatttt tcaagcaagg ggatttcgga       300
     tatttggaat ctcgattggt aaaacatgat atttgtacat cggaccacgt gtcgctatca       360
     actctatctt gctctgacga cttgacacat tgtgtgggaa caaatatttt ctttgatttt       420
     tcaaatttaa atataaaaac ctcaacgaga tatcgacaag atgtaattca agcaggacga       480
     gttggaggta aatgttcaaa tttcgacgaa aaagtattga aacaaaactc aaatgtcaaa       540
     ggatatctaa tgagttgggc tgacgagctg caaaactttc gttcaagctc caattttcaa       600
     atggatcatg atcactgtga tattatattt gagaaaccca caattattat gaaactcgat       660
     gccgcagtga acttgtatca ccacttttgt gatttcttta atttatatgc aagtcttcat       720
     ttgaatcaga catttgatca agatgtggat attatactat gggatactca ccctggcggt       780
     tacaatgatc actattacgg tgtaacatgg aaggcatttt ccaagaatca gcctttcgaa       840
     ttaaaggaat ttgatcaaaa aaaagtgtgc ttcaagcgtg taatgatgcc acttctagct       900
     cgtcagagaa cagggctatt ttacaacagc ccagttgttg aaggatgttc tggatccaag       960
     atgtttagga cgttttctca atttattttg catagattag gaatcagaca accaaaagct      1020
     gatctggaaa aagcccgtat tgtaatatta tcaagatcaa cagcgttccg caaaatattg      1080
     aatattaaag agattcttcg atcacttgga cacctgccaa atgtatccac aagagttgtt      1140
     gattacaatg aaagaatccc gtttgaaaaa caattgaata tcacatcgaa aactgacatt      1200
     ttcataggaa tgcacggagc aggacttact catttgcttt ttttgccaga ttgggccgcg      1260
     gtatttgaaa tatacaattg cggagatccc ggatgctact cggacttggc gagattgaga      1320
     ggcgttaaat attacacctg gccagaagcc aagattaatt tgatccgttc cgatgaagaa      1380
     ggaaaacatc cacaaagtgg agaaaaacat ctcaagtttg ctaattacca tgtcgaccca      1440
     attgaattcc gagaacaagt gagaaagatg gttgatcatg tacgtgctca cccaaagttc      1500
     atcaattctc ggcgagcaca gaaaaggaag caagaggaac gaatggctga acaaaacaaa      1560
     aaagaattat aa                                                          1572
//
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