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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB05556; SV 1; linear; genomic DNA; STD; INV; 1182 BP.
XX
PA   Z83115.1
XX
DE   Caenorhabditis elegans C. elegans protein K11D2.2, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1182
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="I"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="K11D2"
FT   CDS             join(Z83115.1:4471..4613,Z83115.1:5445..6079,
FT                   Z83115.1:6243..6436,Z83115.1:6648..6857)
FT                   /gene="asah-1"
FT                   /locus_tag="K11D2.2"
FT                   /standard_name="K11D2.2"
FT                   /product="C. elegans protein K11D2.2, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans ASAH-1 protein; contains similarity to
FT                   Pfam domain PF02275 Linear amide C-N hydrolases,
FT                   choloylglycine hydrolase family contains similarity to
FT                   Interpro domains IPR003199 (Choloylglycine hydrolase),
FT                   IPR016699 (Acid ceramidase-like)"
FT                   /db_xref="GOA:O45686"
FT                   /db_xref="InterPro:IPR003199"
FT                   /db_xref="UniProtKB/Swiss-Prot:O45686"
FT                   /db_xref="WormBase:WBGene00010769"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAB05556.1"
FT                   /translation="MLRELSVLLLVAVCAAKHVELPAPFKDHCILDDKQNLYDPSKQFD
FT                   IKWYDVNLDLPPSERWVQIATANKEHIADLIGVLINLITPWFPNAIDFVDDVFGDLAPK
FT                   LAQPYRDEIFSIANATGIPLGQITMYNIFYEIFTVCTSVIAQDKDGHVFHARNLDFGLF
FT                   MGWDPVLHDWQISQKLRKMIINVNWLKDGKLLYKSNNFAGYIGIYNGLKPNAFSLTADD
FT                   RFQLVGGYYGILKWVFGLEADGKWMSWLARETLETKTTYLDAKEHLMNTPMLSPVYFIL
FT                   GGSKKDEGCIIARSLDKTALLTEMATSPHGWYLLETNYDQGTEDLYLDDRDTPGFRCMD
FT                   KLTQKNVGFEGIFNVLSSRTNLNKLTTYTVLMSVETSRFETILQSCPGECYPW"
XX
SQ   Sequence 1182 BP; 296 A; 325 C; 283 G; 278 T; 0 other; 548677207 CRC32;
     atgctccgag aattgtcggt tttgttgctg gtggctgtgt gcgccgcaaa gcatgtggag        60
     cttccggctc cgtttaagga tcactgcatc ttggatgata agcagaatct ctatgatcca       120
     agcaagcaat ttgatatcaa gtggtacgat gtgaaccttg atctcccacc atcggagcgt       180
     tgggtgcaga tcgctacagc caacaaggaa cacatcgccg acctgatcgg tgtgctgatc       240
     aatctgatca ctccatggtt cccaaatgcc atcgactttg ttgatgacgt gttcggtgat       300
     ttggcgccaa agctcgctca gccatatcgt gacgagatct tcagtattgc caatgccacc       360
     ggtatcccat tgggacagat caccatgtat aacatcttct acgagatctt caccgtttgc       420
     acatcggtca tcgctcagga caaggacggc cacgttttcc acgccagaaa cctcgatttc       480
     ggactcttca tgggatggga cccagttctt cacgactggc aaatctcgca aaagcttcgt       540
     aagatgatca tcaacgtcaa ctggctcaag gacggaaagc tgttgtacaa gtcgaacaac       600
     tttgccggat acattggaat ctacaacggt ctcaagccaa acgccttctc cttgactgct       660
     gacgatcgat tccagcttgt cggaggatac tacggtattc tcaagtgggt gttcggattg       720
     gaggccgacg gaaaatggat gtcctggttg gcaagagaga ccctcgagac taagaccacc       780
     tacctcgacg ccaaggagca cttgatgaac actccaatgc tctcaccagt ctacttcatt       840
     ctcggaggat ccaagaagga cgagggatgc atcatcgcta gaagtctcga caagaccgca       900
     cttctcaccg agatggccac atccccacac ggatggtacc tgttggagac caactacgat       960
     cagggaaccg aggacctcta ccttgacgac cgtgacactc cgggattccg ttgcatggac      1020
     aagttgaccc agaagaacgt cggattcgag ggaatcttca acgtcttgtc atcccgcacc      1080
     aacctgaata agctcaccac ctacaccgtc ctcatgtccg tcgagacttc tcgcttcgag      1140
     accatccttc aatcctgccc gggagaatgc tatccatggt ag                         1182
//
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