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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB05318; SV 1; linear; genomic DNA; STD; INV; 939 BP.
XX
PA   Z82287.1
XX
DE   Caenorhabditis elegans C. elegans protein ZK550.6, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..939
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="IV"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="ZK550"
FT   CDS             complement(join(Z82287.1:27974..28194,
FT                   Z82287.1:28492..28630,Z82287.1:28904..29085,
FT                   Z80223.1:488..737,Z80223.1:931..1077))
FT                   /locus_tag="ZK550.6"
FT                   /standard_name="ZK550.6"
FT                   /product="C. elegans protein ZK550.6, confirmed by
FT                   transcript evidence"
FT                   /note="contains similarity to Pfam domain PF05721
FT                   Phytanoyl-CoA dioxygenase (PhyH) contains similarity to
FT                   Interpro domain IPR008775 (Phytanoyl-CoA dioxygenase)"
FT                   /db_xref="GOA:O62515"
FT                   /db_xref="InterPro:IPR008775"
FT                   /db_xref="UniProtKB/Swiss-Prot:O62515"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAB05318.1"
FT                   /translation="MLGKGVVDYTREGSILSAEQRRFYEKNGYLLIRNCVPQYELNRFR
FT                   QRFQDICEKKVKAPENMTVMKDISIAKSEFKDGEKAITKIQDFADDPVLFEYCKYPGVV
FT                   DVVKDLIGNPKSNLMAMHTMLINKPPDNGKLTSRHPMHQDLQYFPFRPADFICCAWTAM
FT                   EKITRANGCLVVVPGTHKGVLLPHEYPKWEGGVNKAYHGIQDYDTSTPRIHVEMEPGDT
FT                   VFFHPILIHGSGANRTEGFRKAISCHYANDDLCRYVNVEGTTQETLAEEIIEIAKKRLT
FT                   RYGLDPNTVTLDFADIWRVRAREVNGRRSNL"
XX
SQ   Sequence 939 BP; 284 A; 198 C; 228 G; 229 T; 0 other; 3174108824 CRC32;
     atgcttggca aaggtgtcgt tgattatacc cgggaagggt caattttgag tgccgagcag        60
     aggcgattct acgagaaaaa tggatatctg ttgattcgaa actgtgttcc acagtacgaa       120
     ttgaacaggt tccgacaaag atttcaggac atttgcgaga aaaaagtaaa agctccagaa       180
     aacatgaccg tcatgaaaga catttccatc gcaaaatccg aattcaaaga cggtgagaag       240
     gcgatcacca agatccagga ttttgcagat gatccagttc tttttgagta ctgtaagtat       300
     ccgggagttg tcgatgtggt gaaggacttg attggaaatc caaagtcgaa tttgatggca       360
     atgcatacaa tgcttatcaa taaaccacca gataatggaa aactaacatc ccggcaccca       420
     atgcaccaag atcttcaata tttcccattc cgtccagcag attttatttg ttgtgcttgg       480
     accgcaatgg agaagatcac aagagcaaat ggatgtctgg ttgttgttcc cggaactcat       540
     aaaggtgttc ttttgccaca cgagtacccg aaatgggagg gtggtgtgaa caaagcctat       600
     cacggaatcc aggactatga cacgtcgacg ccacgtatcc acgtggaaat ggaacccgga       660
     gataccgtat tctttcatcc aattcttatt catggttccg gagccaatag aactgaagga       720
     ttccgcaaag cgatctcctg tcactacgca aatgacgacc tctgccgtta tgtaaacgtc       780
     gagggtacaa ctcaagagac attggcagag gagatcatcg aaatcgccaa gaagcgtctg       840
     acaagatatg gtctcgaccc gaatactgta accttggatt tcgcggacat ttggagggtt       900
     cgcgccagag aggtcaatgg gcgcagatct aatttgtga                              939
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