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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB05168; SV 1; linear; genomic DNA; STD; INV; 1542 BP.
XX
PA   Z82264.1
XX
DE   Caenorhabditis elegans C. elegans protein T28F3.9, partially confirmed by
DE   transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1542
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="IV"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="C49C3"
FT   CDS             join(Z82285.1:28261..28377,Z82285.1:28424..28532,
FT                   Z82285.1:29519..29664,Z82285.1:29711..30020,
FT                   Z82285.1:30096..30356,Z82285.1:30403..30545,
FT                   Z82285.1:30589..30707,Z82264.1:57..183,Z82264.1:481..600,
FT                   Z82264.1:649..738)
FT                   /locus_tag="T28F3.9"
FT                   /standard_name="T28F3.9"
FT                   /product="C. elegans protein T28F3.9, partially confirmed
FT                   by transcript evidence"
FT                   /note="contains similarity to Pfam domain PF02485
FT                   Core-2/I-Branching enzyme contains similarity to Interpro
FT                   domain IPR003406 (Glycosyl transferase, family 14)"
FT                   /db_xref="GOA:Q9XTM4"
FT                   /db_xref="InterPro:IPR003406"
FT                   /db_xref="UniProtKB/TrEMBL:Q9XTM4"
FT                   /db_xref="WormBase:WBGene00012135"
FT                   /protein_id="CAB05168.1"
FT                   /translation="MPRIKHFHEPLDEKEALIDENCNDVEFVPNFKYQKRKRKFPAVTK
FT                   LSKYLLLFFGSTVICLCIFYVTKPQLNDNFDPNISDKRKIRIYEDIIDAMRNRKKSGNF
FT                   YIKRPETQHVDCGRILNGDKEYLQTVSNNNRIPLIKNSYLNMSCSSLQSRIQPEQFNFE
FT                   TFKSGSVAFARIVFEDYEFIEKQVQMSWHPDNVFCFVIDTKSSKEFKMNMKKLDDCFEN
FT                   IIVLPAEHSFDSSGHNQNLGHTECMQSLLQFENWTYLLLLQNHDVISKSVYELARIYEI
FT                   LGGANDVNIGAEIDQRRVPGLKWDAKNLKLFRNESGLDDELLKKPMKIASGYVQASLSR
FT                   AAVEWLINTVDLTLFINQFDRTKYGGDEQLISSFQVNSQFEMPGHFTDECSKYRYGHDQ
FT                   ISRMTQWSGGDVKRCASKTIRHGICLIGIEDFRAVSEMPVIMFNKMLPSFDYSIIDCTA
FT                   ELLFNRTFLNQTNIKMNEKYYEEMVTVIYHKDHKNPGYHLNCTPSHQYWKYENYL"
XX
SQ   Sequence 1542 BP; 545 A; 244 C; 290 G; 463 T; 0 other; 2094486012 CRC32;
     atgccacgta taaaacattt ccatgagccc ttggacgaaa aagaagcttt gatcgatgaa        60
     aattgtaacg atgttgaatt tgttccaaac ttcaaatatc aaaagagaaa aagaaagttt       120
     ccagcagtaa caaagctctc taagtatttg ctattatttt ttggaagcac agtaatatgt       180
     ttgtgcattt tttatgtaac gaaacctcag ttaaacgaca actttgatcc aaatatatca       240
     gacaagcgaa aaattcgaat ttatgaggat attattgatg ctatgagaaa tcgaaaaaag       300
     tctgggaatt tctatataaa aaggccagaa acacaacatg ttgattgtgg aagaatattg       360
     aacggagata aagagtactt acaaacagtt tctaacaata atcgaattcc actaatcaaa       420
     aactcatatt tgaacatgtc atgctcatct cttcagagca gaattcaacc tgaacaattt       480
     aatttcgaaa cttttaaatc tggaagtgtt gctttcgcta gaatcgtgtt tgaggattac       540
     gagtttatcg agaaacaagt tcaaatgtct tggcacccgg ataacgtatt ttgttttgtt       600
     atcgatacaa aatcatcgaa ggaatttaaa atgaatatga aaaaattaga tgattgcttt       660
     gaaaatataa ttgtactacc agctgaacat agttttgata gtagtgggca taatcaaaat       720
     cttggccata ccgaatgcat gcaatctctt cttcaattcg aaaattggac atatttacta       780
     cttcttcaaa accatgacgt catttccaaa tctgtctacg aattagctag aatttatgaa       840
     atactcggag gagccaatga tgtaaatatt ggagcagaaa ttgatcagag gcgggttcca       900
     ggactaaaat gggatgcaaa aaacttgaag ttgtttcgaa acgaatcggg actcgatgat       960
     gaacttttga agaaaccaat gaaaatagcc agtggatatg ttcaagcttc actgtcaaga      1020
     gcagctgttg aatggttaat caatacagtg gatttaacat tattcatcaa ccagtttgat      1080
     cgaacgaaat atggcggaga cgagcagctg atttccagtt ttcaagtgaa ttcacaattt      1140
     gaaatgcctg gacactttac ggatgagtgt tccaaatatc gttatgggca tgatcaaatc      1200
     tcaaggatga ctcaatggtc tggcggtgat gtaaaaaggt gtgcctcaaa aaccatacgt      1260
     catgggattt gtctgatcgg aattgaagat ttcagagctg tttctgaaat gccggttatt      1320
     atgtttaata agatgctgcc atcgttcgac tattccataa ttgattgtac agctgaactc      1380
     ctttttaatc gaacgttttt gaatcagaca aatataaaaa tgaatgaaaa gtactatgaa      1440
     gaaatggtta cggttattta tcacaaagat cacaaaaatc cgggttatca tctgaattgc      1500
     acccccagtc atcaatattg gaaatatgaa aattatttgt aa                         1542
//
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