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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB04881; SV 3; linear; genomic DNA; STD; INV; 1386 BP.
XX
PA   Z82060.1
XX
DE   Caenorhabditis elegans C. elegans protein T27F6.1, partially confirmed by
DE   transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1386
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="I"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="T27F6"
FT   CDS             complement(join(Z82060.1:608..670,Z82060.1:716..835,
FT                   Z82060.1:882..1008,Z82060.1:1457..1575,Z82060.1:1617..1765,
FT                   Z82060.1:1810..2070,Z82060.1:2529..2835,
FT                   Z82060.1:2885..3124))
FT                   /locus_tag="T27F6.1"
FT                   /standard_name="T27F6.1"
FT                   /product="C. elegans protein T27F6.1, partially confirmed
FT                   by transcript evidence"
FT                   /note="contains similarity to Pfam domain PF02485
FT                   Core-2/I-Branching enzyme contains similarity to Interpro
FT                   domain IPR003406 (Glycosyl transferase, family 14)"
FT                   /db_xref="GOA:O45866"
FT                   /db_xref="InterPro:IPR003406"
FT                   /db_xref="UniProtKB/TrEMBL:O45866"
FT                   /db_xref="WormBase:WBGene00012102"
FT                   /protein_id="CAB04881.3"
FT                   /translation="MNRSHYFWSFILLVALLCTLNWFLYNYQVYRNHYWSYTQNSSFQE
FT                   DIAKFYPTSNKDVFVYRRRPETENVNCGQVLAGDTAYLKTVTGEYRIKIAENESLNMSC
FT                   EAVMDRILSRDHVLRPLENGVAFARVVYMDYELIEKHVEMSYHPQNSFCFAIDKKAAKE
FT                   FKERMQAMASCLPNVLLLPDDLSVDSHGHNTNLAHYNCLRALINKPGWNYAILLQNHDL
FT                   ITKSVYELEKIFNWLGGANDVAIRPELGRLDKKHFKWDPMSLKLFRNVSESEIDPVILN
FT                   TTLKFAKGAVQSSLSRAAVDWMTRTVDLTTFIDQWNHGTYGVDEQFTQAFQISDFLGMP
FT                   GHFTDKCIKKGIITEGITRFAQWTHGDQSKCASKKSRHGICIMGIEHLSMMAKSEHLMF
FT                   NKVLPLFDYSIIECTAELLFNRTFLGQIHHPLNEEYYSNMINVLYHKHHHEPNYTFNCD
FT                   NDH"
XX
SQ   Sequence 1386 BP; 421 A; 282 C; 299 G; 384 T; 0 other; 3939958399 CRC32;
     atgaacaggt cacattattt ttggtccttc atactccttg ttgctctact gtgcacactg        60
     aattggtttt tatacaacta tcaagtatat agaaaccatt attggtctta tacccagaat       120
     agtagctttc aagaagacat tgctaaattt tatccgacaa gcaacaaaga tgtttttgtc       180
     tatcgacgtc gtccagaaac cgaaaatgtg aattgcggcc aagttttagc aggggatacg       240
     gcctacctga aaacggttac tggagaatat cggatcaaga ttgctgagaa tgaaagtctg       300
     aacatgtcct gtgaggcagt tatggatcga attctatcaa gagaccatgt tttgagaccg       360
     ttggaaaatg gagtggcatt tgcgagagtt gtctacatgg attacgaact gattgagaag       420
     catgtcgaga tgtcctacca tccacaaaac tcattttgct tcgcgattga caaaaaggca       480
     gcgaaggagt ttaaagagag gatgcaagcg atggcatcgt gtcttccaaa tgttctgctt       540
     cttccagacg atctatccgt tgactcacat ggccataaca ccaatctggc acattacaac       600
     tgtcttcgtg ctttgatcaa caagcccggc tggaactatg ctattctact ccaaaaccat       660
     gatcttatca ccaagtcggt gtatgagctc gagaaaatct ttaattggct cggtggtgcc       720
     aatgacgttg ccattaggcc agagctggga cggctcgata agaaacattt caaatgggat       780
     cccatgtcgc tgaaattatt tcggaatgtt tcagaatccg aaatcgaccc tgtgattcta       840
     aatacaactt tgaaatttgc caaaggagct gttcaaagtt cattgtcgag agccgcagtt       900
     gattggatga ctcggacagt tgacttgaca actttcatag atcaatggaa tcatgggaca       960
     tacggcgtgg acgagcaatt cacacaagct tttcaaataa gtgactttct cgggatgcca      1020
     ggacacttta ccgacaaatg cataaagaaa gggattatta cagaaggtat caccagattt      1080
     gcccaatgga cacatggcga tcagagtaag tgtgcctcaa agaagagtcg tcacggaatt      1140
     tgtatcatgg gaatagagca tctgagcatg atggcaaaat ccgaacattt gatgtttaat      1200
     aaggtgttac cattattcga ctactctatt attgaatgca ccgctgagct cctgttcaat      1260
     cgaacctttt tggggcaaat ccatcatcca ctgaatgaag agtactattc aaatatgatc      1320
     aatgttttgt accacaagca ccaccacgag ccaaattaca cgtttaactg tgacaatgat      1380
     cattga                                                                 1386
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