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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB04204; SV 1; linear; genomic DNA; STD; INV; 1113 BP.
XX
PA   Z81516.1
XX
DE   Caenorhabditis elegans C. elegans protein F26H9.5, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1113
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="I"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="F26H9"
FT   CDS             complement(join(Z81516.1:25278..25823,
FT                   Z81516.1:25976..26269,Z81516.1:26461..26542,
FT                   Z81516.1:26721..26790,Z81516.1:26841..26961))
FT                   /locus_tag="F26H9.5"
FT                   /standard_name="F26H9.5"
FT                   /product="C. elegans protein F26H9.5, confirmed by
FT                   transcript evidence"
FT                   /note="contains similarity to Pfam domain PF00266
FT                   Aminotransferase class-V contains similarity to Interpro
FT                   domains IPR020578 (Aminotransferase class-V
FT                   pyridoxal-phosphate binding site), IPR015422 (Pyridoxal
FT                   phosphate-dependent transferase, major region, subdomain
FT                   2), IPR000192 (Aminotransferase, class V/Cysteine
FT                   desulfurase), IPR003248 (Phosphoserine aminotransferase),
FT                   IPR015421 (Pyridoxal phosphate-dependent transferase, major
FT                   region, subdomain 1)"
FT                   /db_xref="GOA:P91856"
FT                   /db_xref="HSSP:1BJN"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="UniProtKB/Swiss-Prot:P91856"
FT                   /db_xref="WormBase:WBGene00009177"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAB04204.1"
FT                   /translation="MAAPGRKINFAAGPAKLPEEVLLKMQEEQLNFNNLGVSVIEMSHR
FT                   SKEFGALLNETISLIRELMNVPDNFEILFMQGGGTGQFAAIPLNLKGDHEHADYIVTGA
FT                   WSSKAADEAGKYINVKKVFQPSKPYVTVPDQENWVHDEKAAYLYYCANETVHGIEFTPT
FT                   APESHNVPLVADVSSNFMARPFDFKDHGVVFGGAQKNLGAAGLTIVIVRKDLIGKQQAI
FT                   TPSVFSYKEMIANNSLYNTPPTGGIYTTNLVLKWIKSKGGLQAIYELNLQKSGMIYDII
FT                   DNSNGFYHCAVDKRYRSIMNVCFRIGGPSGNDELEEKFLKGSIERNMISLKGHRSVGGI
FT                   RASLYNAISVEETQVLATWMNEFQKLHNTN"
XX
SQ   Sequence 1113 BP; 355 A; 214 C; 232 G; 312 T; 0 other; 1010514168 CRC32;
     atggcagctc ccggacgaaa aattaacttt gctgctggtc cagcaaagct tcctgaagaa        60
     gttttactta aaatgcaaga agaacaactc aatttcaata atctaggagt cagtgtcatt       120
     gaaatgtcgc atagatcgaa ggaattcgga gctcttctca atgaaactat cagtcttatt       180
     cgggaactta tgaacgtacc agacaacttt gaaattcttt tcatgcaagg cggcggaacc       240
     ggtcaattcg ccgctattcc tctcaatctt aagggtgatc atgaacacgc ggactacatt       300
     gtgacaggcg cgtggtcttc aaaagcagca gatgaggctg gaaaatatat caatgtgaag       360
     aaggtttttc aaccatcaaa accgtatgtc actgtaccag atcaagagaa ttgggttcac       420
     gatgaaaaag ccgcatatct gtattattgt gccaatgaga ctgtacatgg aattgaattt       480
     actccaactg ctccagaatc acataatgtt ccattggtgg ctgatgtttc ttcgaatttc       540
     atggctagac catttgattt taaagatcac ggagtggttt tcggtggagc tcagaaaaac       600
     cttggcgccg ctggtcttac aatcgttatt gttcggaaag atcttatcgg aaagcaacaa       660
     gcaatcactc catctgtctt cagttataaa gaaatgattg caaataatag tttgtataat       720
     acaccaccaa ctggaggtat ctacacaaca aatctcgttc tcaaatggat aaaatcaaaa       780
     ggtggacttc aagcaatcta tgagctaaac cttcaaaaat ctggaatgat ttatgatata       840
     attgataatt caaatggttt ttatcactgc gccgttgaca aacgctaccg tagtattatg       900
     aatgtttgct tccgaattgg cggtccatct ggaaacgatg aacttgagga gaagttcttg       960
     aaaggatcta ttgaacgaaa tatgattagt ttaaagggac atagatcagt tggtggaatc      1020
     cgtgcatcgc tctataatgc catctcagtc gaggagacac aagtacttgc cacgtggatg      1080
     aatgagttcc agaaactcca taatactaac tag                                   1113
//
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