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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB03798; SV 1; linear; genomic DNA; STD; INV; 900 BP.
XX
PA   Z81453.1
XX
DE   Caenorhabditis elegans C. elegans protein B0250.5, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..900
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="V"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="B0250"
FT   CDS             join(Z81453.1:37116..37238,Z81453.1:37291..37415,
FT                   Z81453.1:37522..37652,Z81453.1:38326..38530,
FT                   AL031630.1:386..503,AL031630.1:1049..1246)
FT                   /locus_tag="B0250.5"
FT                   /standard_name="B0250.5"
FT                   /product="C. elegans protein B0250.5, confirmed by
FT                   transcript evidence"
FT                   /note="contains similarity to Pfam domain PF03446 NAD
FT                   binding domain of 6-phosphogluconate dehydrogenase contains
FT                   similarity to Interpro domains IPR006115
FT                   (6-phosphogluconate dehydrogenase, NAD-binding), IPR015815
FT                   (3-hydroxyacid dehydrogenase/reductase), IPR011548
FT                   (3-hydroxyisobutyrate dehydrogenase), IPR002204
FT                   (3-hydroxyisobutyrate dehydrogenase-related, conserved
FT                   site)"
FT                   /db_xref="GOA:Q9XTI0"
FT                   /db_xref="InterPro:IPR002204"
FT                   /db_xref="InterPro:IPR006115"
FT                   /db_xref="InterPro:IPR008927"
FT                   /db_xref="InterPro:IPR011548"
FT                   /db_xref="InterPro:IPR013328"
FT                   /db_xref="InterPro:IPR015815"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9XTI0"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAB03798.1"
FT                   /translation="MSLTGFIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGC
FT                   EVAAHPADIAAASKEIITVLPSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLE
FT                   VAQAAALLKAEYIDAPISGGVTGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLG
FT                   AVGNGTAAKICNNMLLGIQMVAVAETMNLGISMGLDAKALAGIVNTSSGRCWSSDTYNP
FT                   VPGVIENIPSCRGYAGGFGTTLMAKDLSLAQNASTNTQAPTPMGSLAHQIYRILARDPQ
FT                   YQAKDFGVVYQFLKKQNS"
XX
SQ   Sequence 900 BP; 243 A; 226 C; 221 G; 210 T; 0 other; 1556493521 CRC32;
     atgtctctca ccgggttcat cggtctcggc aacatgggcg gccatatggc ccggaatttg        60
     atcaaaaacg ggaagaaact catcgtctac gatgttaata aggcagtagt gcaggagttt       120
     aaggcagaag gctgtgaagt cgccgctcac cctgctgata tcgccgccgc ttcgaaagaa       180
     atcatcacag tgcttccgag ctctccacac gtgaaagccg tctatcaagg cgaagctgga       240
     atttttaaaa ccatccagcc tggaacactg tgcatggatt cctccacaat cgatcaaatt       300
     gtgtcactgg aagttgctca ggccgccgct ttgctcaaag ccgagtatat cgacgcccca       360
     atctccggtg gagtcactgg cgcccagcaa gctacactaa catttatggt tggagccgga       420
     aacgatgcaa ctttcaagcg tgccgaagcg gttttaagcc ttatgggcaa aaatatcgtg       480
     aatttgggag ccgtcggcaa cggaacagcc gccaaaatct gcaataatat gcttttggga       540
     atccagatgg tcgctgtcgc ggagactatg aatttaggca tctcaatggg tctcgacgcg       600
     aaagcgcttg ccggaatcgt gaatacatcg tcaggaaggt gttggtcgtc ggacacgtac       660
     aatccagtac ccggagtcat tgaaaacatc ccttcgtgca ggggttatgc tggcggcttc       720
     ggaacgactc taatggcaaa agacctttca ttggctcaaa atgcttcaac aaatactcaa       780
     gcaccaactc caatgggctc actggctcat caaatctacc gtattctggc tcgtgatcca       840
     cagtaccagg caaaggattt cggtgtcgtc tatcagtttt tgaagaaaca aaactcataa       900
//
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