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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB03291; SV 1; linear; genomic DNA; STD; INV; 1098 BP.
XX
PA   Z81115.1
XX
DE   Caenorhabditis elegans C. elegans protein T05D4.1, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1098
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="III"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="T05D4"
FT   CDS             complement(join(Z81115.1:9359..9886,Z81115.1:10126..10601,
FT                   Z81115.1:10702..10795))
FT                   /gene="aldo-1"
FT                   /locus_tag="T05D4.1"
FT                   /standard_name="T05D4.1"
FT                   /product="C. elegans protein T05D4.1, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans ALDO-1 protein; contains similarity to
FT                   Pfam domain PF00274 Fructose-bisphosphate aldolase class-I
FT                   contains similarity to Interpro domains IPR013785
FT                   (Aldolase-type TIM barrel), IPR000741
FT                   (Fructose-bisphosphate aldolase, class-I)"
FT                   /db_xref="GOA:P54216"
FT                   /db_xref="HSSP:1ADO"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="UniProtKB/Swiss-Prot:P54216"
FT                   /db_xref="WormBase:WBGene00011474"
FT                   /func_characterised="similar sequence"
FT                   /protein_id="CAB03291.1"
FT                   /translation="MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLN
FT                   SIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGII
FT                   PGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTA
FT                   LKEIASNLARYASICQQNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHV
FT                   FLEGTLLKPNMVTSGQSFTGEKPSNADIGLATVTALQRGVPSAVPGVVFLSGGQSEEDA
FT                   TLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLAS
FT                   VGKYTGDASADAAASQSLFVANHSY"
XX
SQ   Sequence 1098 BP; 281 A; 341 C; 255 G; 221 T; 0 other; 1821200235 CRC32;
     atggcttctt actcgcaatt cttgaccaag gcccaggagg acgaactccg ctccatcgcc        60
     aacgccatcg tcaccccagg aaagggaatt ctcgccgccg atgagtccac cggatccatg       120
     gacaagcgtc ttaacagcat cggactcgag aacaccgagg agaaccgccg caagtatcgt       180
     caacttctgt ttaccgccgg agccgacctc aacaagtaca tctcgggagt catcatgttc       240
     cacgagacat tctaccaaaa gaccgacgac ggaaagccat tcactgctct tctccaggag       300
     caaggaatca ttccaggaat caaggttgac aagggtgtcg tcccaatggc cggaaccatc       360
     ggagagggaa ccactcaggg attggatgac ttgaatgctc gttgcgctca atacaagaaa       420
     gacggagcac agttcgccaa gtggagatgc gtgcacaaga tctcatctac gactccatca       480
     gtgactgctc ttaaggaaat tgcctccaac ttggctcgct atgcttcaat ttgccaacaa       540
     aatggacttg taccaattgt tgagccagag atcctcccag acggtgaaca ctgcttggct       600
     cgcggacaga agatcaccga gaccgtgctc tcatatgtgt accacgctct caacgagcat       660
     cacgtcttcc tcgagggaac cctcctcaag ccaaacatgg tcacctccgg acaatcattc       720
     accggcgaga agccatcgaa tgccgatatc ggactcgcca ccgtcaccgc cctccaacgc       780
     ggagtcccat ccgccgttcc aggagtcgtc ttcctctccg gtggacaatc cgaagaggat       840
     gccacattga acttgaacgc catcaatcaa gtgagcggaa agaagccatg ggccctcaca       900
     ttctcctatg gacgtgctct tcaagcctcc tgtctcgcca agtgggccgg aaaggacgag       960
     aacatcgcag ccgcccaaga agtcctgctc catcgtgctc aggtcaactc ccttgcctct      1020
     gtcggaaaat acaccgggga tgcttcagct gacgcagccg cttcccaatc cctcttcgtc      1080
     gccaatcatt cttattaa                                                    1098
//
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