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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAB01454; SV 2; linear; genomic DNA; STD; INV; 1644 BP.
XX
PA   Z78019.1
XX
DE   Caenorhabditis elegans C. elegans protein ZK863.3, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1644
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="V"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="ZK863"
FT   CDS             complement(join(Z78019.1:12657..12914,
FT                   Z78019.1:12957..13225,Z78019.1:13274..13910,
FT                   Z78019.1:13960..14319,Z78019.1:14364..14483))
FT                   /gene="elpc-3"
FT                   /locus_tag="ZK863.3"
FT                   /standard_name="ZK863.3"
FT                   /product="C. elegans protein ZK863.3, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans ELPC-3 protein; contains similarity to
FT                   Pfam domains PF04055 (Radical SAM superfamily) , PF00583
FT                   (Acetyltransferase (GNAT) family) contains similarity to
FT                   Interpro domains IPR007197 (Radical SAM), IPR006638
FT                   (Elongator protein 3/MiaB/NifB), IPR000182 (GCN5-related
FT                   N-acetyltransferase), IPR016181 (Acyl-CoA
FT                   N-acyltransferase), IPR005910 (Histone acetyltransferase
FT                   ELP3)"
FT                   /db_xref="GOA:Q23651"
FT                   /db_xref="InterPro:IPR007197"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q23651"
FT                   /db_xref="WormBase:WBGene00014123"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAB01454.2"
FT                   /translation="MDQKGSQRALLAQTINEIVKLLIEAHNQKKDVNLNRLKCIVAQKN
FT                   GLSFQPKLVDIIAGVPSDYKDSLLPKLKAKPVRTASGIAVVAVMSKPHRCPHINFTGNI
FT                   CVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYLQTRGRLNQLMQLGHSVDKVEF
FT                   IVMGGTFMSLPEDYRDFFIRNLHDALSGHTSASVEEAVAYSERSKMKCIGITIETRPDY
FT                   CLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHTVKSVCETFHMAKDTGYKVVIHM
FT                   MPDLPNVGLERDKEQFLELFESPAFRPDGLKLYPTLVIRGTGLYELWKTGRYQSYPPSV
FT                   LVDLIATILSLVPPWTRVYRVQRDIPMPLVSSGVEHGNLREHAMAKMKELGLKCRDVRT
FT                   REVGIQEIHNKVRPEDVELIRRDYTANGGWETFISYEDPKQDILIGLLRLRKISDKAHR
FT                   PELKGNVSVVRELHVYGSVVSVADRDPKKFQHQGYGSLLMEEAERIAREEHGSDKIAVI
FT                   SGVGTREYYRKLGYELDGPYMSKMLDSAAA"
XX
SQ   Sequence 1644 BP; 499 A; 322 C; 376 G; 447 T; 0 other; 760013227 CRC32;
     atggatcaga agggttcaca aagagcacta ctggcacaaa caataaatga aattgtcaag        60
     cttcttattg aagctcacaa tcaaaaaaag gatgtcaact tgaatcggct gaaatgcatc       120
     gttgctcaaa agaatggact gagttttcaa ccgaaactcg ttgacattat cgctggagtt       180
     ccgtccgatt acaaagacag ccttcttcca aaactcaagg caaaaccagt tcgaactgct       240
     tctggaattg ctgttgtagc agtgatgagc aaaccacatc gttgtcctca catcaatttc       300
     actggaaaca tttgtgtcta ttgtcccggt gggccagatt ctgatttcga gtattcaaca       360
     caaagttaca ccggttatga gcctacaagt atgcgtgcaa ttcgtgctag atataaccct       420
     tatttgcaaa ctcgtggaag actcaatcaa ttgatgcaac tcggacactc agttgataaa       480
     gttgaattca tcgtaatggg aggaacattt atgtcgctgc ctgaagatta tcgagacttt       540
     ttcattcgaa atctacatga tgcactgagt ggacatacat cagcgtcagt tgaagaagca       600
     gtagcttatt ctgaaaggtc taaaatgaaa tgtattggaa tcactattga aactcgtcct       660
     gattattgtc taccccgtca tctgaacgat atgcttctct atggatgtac aagactagaa       720
     atcggtgtcc agtcgaccta cgaagatgtt gcacgtgata cgaatagagg tcatactgta       780
     aaatcggtgt gcgagacatt tcacatggca aaggatactg gatacaaagt tgtcattcac       840
     atgatgccag atctccctaa tgttggtcta gaacgagaca aggaacaatt tctggaactt       900
     tttgaaagtc cagccttccg acctgacggt ctgaagctgt acccaacatt ggtcattcgt       960
     ggaacaggac tatatgagtt gtggaaaact ggaagatatc aaagttatcc accatcagtt      1020
     cttgttgatt tgattgctac tatcttatca ttagttccgc catggacacg tgtgtatcga      1080
     gtgcaaagag atatccccat gccattagta tcttcaggcg ttgaacatgg aaatcttcgt      1140
     gaacatgcga tggcaaaaat gaaagaactc ggtttgaaat gtcgagacgt tcgaacgaga      1200
     gaagttggaa ttcaagagat tcataataaa gttcgtcctg aagatgtgga gctcattagg      1260
     cgagattaca cagcaaatgg tggttgggag acgtttatct cttatgagga tccgaaacaa      1320
     gacattctta ttggacttct tcgattgaga aaaatttcag ataaagccca tcggccagag      1380
     ttgaagggta atgtgtcagt ggttcgcgag ttgcatgtat acggatccgt cgtttcggta      1440
     gcggatcgtg atcccaagaa gttccagcat caaggatacg gttcactttt gatggaagaa      1500
     gctgaaagga tagccagaga agaacatgga tccgataaaa tcgcagtcat ctcgggcgtt      1560
     ggaactcgag agtactaccg taaacttgga tacgagctgg atggtcctta tatgagcaag      1620
     atgctcgact ctgctgcagc ttaa                                             1644
//
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