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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA99897; SV 2; linear; genomic DNA; STD; INV; 756 BP.
XX
PA   Z75547.1
XX
DE   Caenorhabditis elegans C. elegans protein R11D1.11, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..756
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="V"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="R11D1"
FT   CDS             complement(join(Z75547.1:29470..29637,
FT                   Z75547.1:29683..29801,Z75547.1:29847..30147,
FT                   Z75547.1:30199..30308,Z75527.1:549..606))
FT                   /gene="dhs-21"
FT                   /locus_tag="R11D1.11"
FT                   /standard_name="R11D1.11"
FT                   /product="C. elegans protein R11D1.11, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans DHS-21 protein; contains similarity to
FT                   Pfam domains PF08659 (KR domain) , PF00106 (short chain
FT                   dehydrogenase) , PF02719 (Polysaccharide biosynthesis
FT                   protein) contains similarity to Interpro domains IPR003869
FT                   (Polysaccharide biosynthesis protein CapD-like), IPR013968
FT                   (Polyketide synthase, KR), IPR002424 (Insect alcohol
FT                   dehydrogenase family), IPR003560
FT                   (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase),
FT                   IPR002347 (Glucose/ribitol dehydrogenase), IPR002198
FT                   (Short-chain dehydrogenase/reductase SDR), IPR016040
FT                   (NAD(P)-binding domain)"
FT                   /db_xref="GOA:Q21929"
FT                   /db_xref="HSSP:1LXC"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q21929"
FT                   /db_xref="WormBase:WBGene00000984"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA99897.2"
FT                   /translation="MPANYDFTDKRILVTGASQGIGKEICLSLAKAGAQVIAFARNEAN
FT                   LLSLVKETTSLRYTIIPIVGDVSANEEVLFKLIVPHFPIHGLVNNAGIATNHAIGQITQ
FT                   QSIDRTFAVNVRGPILIAQLVARNFVDRQIKGSIVNISSQAAIRPLDNHTVYCASKAAL
FT                   DMVTRCLANELGSQNIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRMPIKRFAEVDEV
FT                   VNAVLFLLSDNASMTTGSTLPVDGGFSNN"
XX
SQ   Sequence 756 BP; 238 A; 138 C; 157 G; 223 T; 0 other; 885171893 CRC32;
     atgcccgcca attacgattt cactgacaaa cgtatacttg tcacaggagc aagtcaagga        60
     attggaaaag aaatctgcct ttcgttggcc aaagctggag cgcaggttat tgcattcgcg       120
     agaaatgaag caaatttgtt gagtcttgtc aaagagacta cttctttgag atatacaata       180
     attccaattg ttggagatgt gagtgccaat gaagaggtcc ttttcaaact tatcgtacca       240
     catttcccaa ttcatggtct tgtaaataat gctggaattg caacaaatca tgcaattgga       300
     caaattactc aacaatcaat tgatagaaca tttgcagtca acgtaagggg acctattctc       360
     attgcacaat tagttgctag aaactttgtg gatagacaaa tcaaaggatc aattgttaat       420
     atttcatcac aagcagccat tcgtccattg gataatcaca ctgtttattg tgcatcaaaa       480
     gctgctcttg atatggtcac aagatgtctt gcaaatgaat tgggatccca gaatattcga       540
     gttaatagtg tcaatccaac tgttgtgatg actgatatgg gaagagataa ctggagtgat       600
     cctgataaga agaagaagat gctcgacaga atgccgatca aacgttttgc tgaggttgac       660
     gaagttgtga atgctgtcct tttccttctt tcagacaatg cttcaatgac tactggatcc       720
     actttgcctg tcgatggagg attttcgaat aactaa                                 756
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