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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA97412; SV 1; linear; genomic DNA; STD; INV; 1569 BP.
XX
PA   Z73102.1
XX
DE   Caenorhabditis elegans C. elegans protein B0035.5, partially confirmed by
DE   transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1569
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="IV"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="B0035"
FT   CDS             join(Z73102.1:23132..23257,Z73102.1:23311..23517,
FT                   Z73102.1:23934..24009,Z73102.1:24054..24306,
FT                   Z73102.1:24365..24666,Z73102.1:24728..24865,
FT                   Z73102.1:24918..25119,Z73102.1:25171..25347,
FT                   Z73102.1:25401..25488)
FT                   /gene="gspd-1"
FT                   /locus_tag="B0035.5"
FT                   /standard_name="B0035.5"
FT                   /product="C. elegans protein B0035.5, partially confirmed
FT                   by transcript evidence"
FT                   /note="C. elegans GSPD-1 protein; contains similarity to
FT                   Pfam domains PF00479 (Glucose-6-phosphate dehydrogenase,
FT                   NAD binding domain) , PF02781 (Glucose-6-phosphate
FT                   dehydrogenase, C-terminal domain) contains similarity to
FT                   Interpro domains IPR019796 (Glucose-6-phosphate
FT                   dehydrogenase, active site), IPR001282 (Glucose-6-phosphate
FT                   dehydrogenase), IPR016040 (NAD(P)-binding domain)"
FT                   /db_xref="GOA:Q27464"
FT                   /db_xref="InterPro:IPR001282"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="InterPro:IPR019796"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q27464"
FT                   /db_xref="WormBase:WBGene00007108"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA97412.1"
FT                   /translation="MACKRHSVSDPISKDLVECLRESMQRDLKFETPYVFVIFGASGDL
FT                   AKKKIYPTLWWLFRDNLLPVNIKFIGYARSDLTVFKLRESFEKNCKVRENEKCAFDDFI
FT                   KKCSYVQGQYDTSEGFQRLQSSIDDFQKESNNQAVNRLYYLALPPSVFNVVSTELKKNC
FT                   MDHGDSWTRVIIEKPFGHDLKSSCELSTHLAKLFKEDQIYRIDHYLGKEMVQNLMVMRF
FT                   GNRILAPSWNRDHIASVMISFKEDFGTGGRAGYFDTAGIIRDVMQNHLMQILTLVAMEK
FT                   PASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADST
FT                   TPTYALAVVHINNERWEGVPFFLRCGKALNEKKAEVRIQFKEVSGDIYPSGELKRSELV
FT                   MRVQPNEAVYMKLMTKKPGMGFGVEETELDLTYNNRFKEVRLPDAYERLFLEVFMGSQI
FT                   NFVRTDELEYAWRILTPVLEELKKKKVQPVQYKFGSRGPTEGDELMKKYGFIFTGTYKW
FT                   VAPKL"
XX
SQ   Sequence 1569 BP; 491 A; 287 C; 332 G; 459 T; 0 other; 640827406 CRC32;
     atggcatgca aacgtcattc agtgtccgat cccatttcga aggatctcgt cgagtgtctt        60
     cgtgaatcaa tgcaaagaga tctcaaattt gagactccgt acgttttcgt gatatttgga       120
     gcatcgggag atctcgcaaa aaagaaaata tacccaacac tgtggtggtt gttccgtgac       180
     aaccttttgc cagtcaacat caaatttatt ggatatgccc gttccgatct gacagttttc       240
     aagcttcgtg aatcttttga gaaaaactgt aaagttcgag aaaatgagaa atgtgctttt       300
     gatgacttca tcaagaagtg ctcatacgtt cagggccaat acgacacttc tgaaggattc       360
     caacgccttc aatcttcaat tgatgatttc caaaaagaaa gcaataatca agccgtcaat       420
     cgtctctact acctcgctct tcctccatca gttttcaacg tggtttctac ggaattaaag       480
     aagaattgta tggatcatgg tgattcatgg acacgtgtta tcatagaaaa accatttgga       540
     catgatttga aatcatcttg tgaactttca actcatttgg cgaaactttt taaagaagat       600
     caaatctacc gtattgatca ttatctcgga aaagaaatgg ttcagaattt gatggttatg       660
     cgatttggaa accgaattct cgctccatct tggaaccgcg atcacattgc atcagttatg       720
     atctcattta aagaagattt tggaactggt ggccgtgctg gatattttga tacagctgga       780
     attatccgtg atgttatgca gaatcatttg atgcaaattc taactttagt cgccatggag       840
     aaaccagcaa gtttgaatgc tgaagatatt cgtgatgaaa aggtcaaagt gttgaaagct       900
     gctaaagttg tagaattaaa ggatgtagta gttggacaat acattgccag tcctgaattt       960
     gatcacccag aagcatcaca aggatacaaa gatgacaaat cagttccagc cgattcgact      1020
     actccaacgt atgctcttgc tgttgttcac atcaataatg aacgttggga gggtgttcca      1080
     ttcttcttgc gttgtggaaa agctctcaac gagaagaaag cagaagttcg tatacaattc      1140
     aaagaagtca gtggagatat ctatccgtct ggtgaattaa agcgatccga attagtgatg      1200
     agagtgcaac caaatgaggc agtttacatg aaactgatga ccaagaaacc tggaatggga      1260
     ttcggtgttg aagaaactga acttgatttg acttataata atagattcaa agaagtccgt      1320
     cttcctgatg cttatgaacg cctatttctc gaagtattca tgggatctca aattaatttc      1380
     gttcgaactg atgagcttga atacgcttgg cgtattttga cgccagttct cgaagagctt      1440
     aaaaagaaga aagttcaacc ggttcaatat aaatttggaa gtcgtggtcc aactgaaggt      1500
     gacgaattga tgaaaaagta cggtttcatc ttcactggaa catacaaatg ggttgctcca      1560
     aagctataa                                                              1569
//
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