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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA95817; SV 2; linear; genomic DNA; STD; INV; 1323 BP.
XX
PA   Z71262.1
XX
DE   Caenorhabditis elegans C. elegans protein F22D6.11, partially confirmed by
DE   transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1323
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="I"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="F22D6"
FT   CDS             join(Z71262.1:36882..37076,Z71262.1:37126..37214,
FT                   Z71262.1:37260..37368,Z71262.1:37499..37630,
FT                   Z71262.1:37686..37913,Z71262.1:38157..38231,
FT                   Z71262.1:38287..38652,Z71262.1:38801..38929)
FT                   /gene="gly-18"
FT                   /locus_tag="F22D6.11"
FT                   /standard_name="F22D6.11"
FT                   /product="C. elegans protein F22D6.11, partially confirmed
FT                   by transcript evidence"
FT                   /note="C. elegans GLY-18 protein; contains similarity to
FT                   Pfam domain PF02485 Core-2/I-Branching enzyme contains
FT                   similarity to Interpro domain IPR003406 (Glycosyl
FT                   transferase, family 14)"
FT                   /db_xref="GOA:Q19730"
FT                   /db_xref="InterPro:IPR003406"
FT                   /db_xref="UniProtKB/TrEMBL:Q19730"
FT                   /db_xref="WormBase:WBGene00001643"
FT                   /protein_id="CAA95817.2"
FT                   /translation="MVRLKGTIPSLVTYAALVIFLYLFIVKPLVPRILESLNSSRNPQE
FT                   TSILSKIENDLLDDLDINCLNIFNGSKNRNQLRIVNSRSIEDKLLYSTDRCQTLKSLFR
FT                   FNKVPLSPEEESFPLSYGLLVYKELSQVLFMLSSIYHPQNEYCIAVGENSAPIFQNLLK
FT                   ELSNCFSNIHFMKRPPIDWGSHEIINSAYDCLEFLSHLKSDWRYFQYLSGVDIPLKTNL
FT                   EMVQILKHLNGTANVEIKPYQYQRLRGKNETQSPLPLFKSSLSSLIPREAANHLSSSSI
FT                   PQQLLEFLRNTGIADEGFWGTLFGNKNLFDIPGSLNFKEWISYKNNVETNLTYPTDGWR
FT                   YYISRDQIWSKPNCHNYMKAGSCVFGIGDVPRLLKSKALVAHKFYLKSEPEAYFCLLKE
FT                   HRRRTCNPDLTFDASKYSELPQVELSRGLAMPQLTHKNWIL"
XX
SQ   Sequence 1323 BP; 450 A; 239 C; 223 G; 411 T; 0 other; 3598533881 CRC32;
     atggtacgat taaaaggcac aattcctagt cttgttacat atgctgcact tgttattttt        60
     ctttacttat tcattgttaa accattagtt ccaagaatat tggaaagcct aaattcatct       120
     cgaaacccgc aggaaacgag cattttgtca aagatcgaga atgacttgct tgatgatctg       180
     gatattaatt gcttgaatat ttttaatggt tccaagaata gaaatcaatt acgcatagtt       240
     aattcaagaa gtatagaaga taaattgctg tactcaaccg atagatgcca aacgctgaaa       300
     tctctattcc gattcaataa agtaccgcta tcaccagaag aagaaagttt tccattgtca       360
     tatggacttc tcgtatacaa ggaattatca caggttctat tcatgctctc atcaatttat       420
     catcctcaaa acgaatactg tattgcagtt ggcgaaaatt cagctccaat ttttcaaaat       480
     ttgctcaaag agctctcaaa ttgcttttca aatattcatt ttatgaaacg accgccgatt       540
     gattggggaa gccacgaaat aataaattca gcatatgatt gtctggaatt tctgagtcac       600
     ttgaaatccg attggagata ttttcaatat ttatcaggag ttgatattcc attaaagaca       660
     aatcttgaaa tggttcaaat attgaaacat ctgaatggaa ctgcaaatgt cgaaatcaaa       720
     ccatatcaat atcaacgcct tcgaggtaaa aatgagactc agtctccact gccgcttttt       780
     aagtcatcac tgtcatcact aataccaaga gaagctgcca atcacttatc atcatcaagc       840
     attcctcaac aactattgga atttcttcga aatactggaa ttgctgatga aggattttgg       900
     ggaactcttt ttggaaacaa gaacttgttt gatattcctg gatctttgaa tttcaaagaa       960
     tggatatcat acaaaaataa tgtagaaacg aacttaacat atcccactga tggatggaga      1020
     tattatatat ccagagatca aatatggtca aagcccaatt gtcataatta catgaaagct      1080
     gggtcatgtg tttttggaat tggagatgtc ccaagattat tgaagtcaaa agcgttggtt      1140
     gctcataaat tttacctaaa atcagagcca gaagcatatt tttgtttatt aaaggaacac      1200
     cgtcgccgaa cgtgtaatcc cgatttaaca tttgatgcat caaaatactc agagttaccg      1260
     caagttgaac tatcacgagg tcttgccatg ccacaactga cacataaaaa ttggatttta      1320
     tga                                                                    1323
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