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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA94380; SV 1; linear; genomic DNA; STD; INV; 1455 BP.
XX
PA   Z70311.1
XX
DE   Caenorhabditis elegans C. elegans protein T25B9.9, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1455
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="IV"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="T25B9"
FT   CDS             join(Z70311.1:24659..24988,Z70311.1:25112..25181,
FT                   Z70306.1:3739..4179,Z70306.1:4841..5114,
FT                   Z70306.1:5169..5265,Z70306.1:5934..6032,
FT                   Z70306.1:6292..6435)
FT                   /locus_tag="T25B9.9"
FT                   /standard_name="T25B9.9"
FT                   /product="C. elegans protein T25B9.9, confirmed by
FT                   transcript evidence"
FT                   /note="contains similarity to Pfam domains PF03446 (NAD
FT                   binding domain of 6-phosphogluconate dehydrogenase) ,
FT                   PF00393 (6-phosphogluconate dehydrogenase, C-terminal
FT                   domain) contains similarity to Interpro domains IPR006115
FT                   (6-phosphogluconate dehydrogenase, NAD-binding), IPR006113
FT                   (6-phosphogluconate dehydrogenase, decarboxylating),
FT                   IPR006184 (6-phosphogluconate-binding site), IPR012284
FT                   (Fibritin/6-phosphogluconate dehydrogenase, C-terminal
FT                   extension), IPR013328 (Dehydrogenase, multihelical),
FT                   IPR006183 (6-phosphogluconate dehydrogenase), IPR006114
FT                   (6-phosphogluconate dehydrogenase, C-terminal), IPR016040
FT                   (NAD(P)-binding domain)"
FT                   /db_xref="GOA:Q17761"
FT                   /db_xref="InterPro:IPR006113"
FT                   /db_xref="InterPro:IPR006114"
FT                   /db_xref="InterPro:IPR006115"
FT                   /db_xref="InterPro:IPR006183"
FT                   /db_xref="InterPro:IPR006184"
FT                   /db_xref="InterPro:IPR008927"
FT                   /db_xref="InterPro:IPR012284"
FT                   /db_xref="InterPro:IPR013328"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q17761"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA94380.1"
FT                   /translation="MAEADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLAN
FT                   EAKGTKIIGAHSIEEMCKKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNS
FT                   EYTDSNRRSEQLAAKGIMFVGCGVSGGEEGARFGPSLMPGGNPKAWPHLKDIFQKIAAK
FT                   SNGEPCCDWVGNAGSGHFVKMVHNGIEYGDMQLIAEAYHLLSKAVELNHDQMAEVLDDW
FT                   NKGELESFLIEITANILKYRDEQGEPIVPKIRDSAGQKGTGKWTCFAALEYGLPVTLIG
FT                   EAVFARCLSALKDERVRASKQLPRPQVSPDTVVQDKRVFIKQISKALYASKIVSYAQGF
FT                   MLLAEASKQFNWNLNFGAIALMWRGGCIIRSRFLGDIEHAFQKNKQLSNLLLDDFFTKA
FT                   ITEAQDSWRVVVCAAVRLGIPVPAFSSALAFYDGYTSEVVPANLLQAQRDYFGAHTYEL
FT                   LAKPGTWVHTNWTGTGGRVTSNAYNA"
XX
SQ   Sequence 1455 BP; 409 A; 317 C; 338 G; 391 T; 0 other; 568439578 CRC32;
     atggccgaag ctgatattgc cgtcatcgga ttggccgtta tgggtcaaaa tcttattctg        60
     aacatgaatg atcacggatt cactgtttgc gccttcaaca gaactgtcaa attggtcgac       120
     gattttcttg ccaatgaagc taaaggaact aagattattg gagctcattc aattgaggaa       180
     atgtgcaaga aattgaaaag accacgtcgt gtcatgatgc tcattaaagc cggaactcct       240
     gtcgatatga tgatcgatgc aattgttccg catcttgagg aaggtgatat tatcattgat       300
     ggaggaaatt ctgaatacac tgattcaaac agacgctccg agcaactcgc cgcaaagggg       360
     atcatgttcg tcggctgtgg agtttccgga ggagaagaag gagctcgttt tggaccatct       420
     cttatgccag gaggtaatcc aaaagcctgg ccacatctga aagacatctt ccaaaagatc       480
     gctgccaagt caaacggaga accatgctgt gattgggtag gaaacgctgg atccggtcac       540
     ttcgtgaaaa tggttcataa tggaattgaa tatggagaca tgcaactgat agctgaagca       600
     tatcatcttc tgagcaaggc cgtcgagctg aatcacgatc aaatggctga agttcttgat       660
     gattggaata aaggagaatt ggaatctttc cttattgaaa tcaccgctaa tattttgaaa       720
     taccgtgacg agcaaggaga gccaattgtt ccaaagattc gtgattctgc tggacaaaag       780
     ggaactggaa aatggacttg tttcgctgct cttgagtatg gacttcctgt tactcttatc       840
     ggagaagccg ttttcgccag atgtctatct gctctgaagg atgaacgtgt tcgtgcttcg       900
     aaacaacttc ctcgtccaca agtctcacca gataccgtcg ttcaggacaa aagagtcttc       960
     atcaagcaaa tcagcaaggc tctttacgcc tcaaaaatcg tcagttatgc tcaaggattt      1020
     atgcttcttg ccgaagcatc taaacaattc aactggaatt tgaactttgg agctattgct      1080
     ttgatgtgga gaggaggatg cattattcgt tcaagattcc tcggagacat tgaacacgct      1140
     ttccaaaaga acaagcaact ttccaatctt cttctcgatg atttcttcac caaggccatc      1200
     accgaagcgc aggattcatg gcgtgttgtt gtgtgtgcag ctgttcgtct cggaattcca      1260
     gttccagcat tctcatcggc cctcgctttc tatgatggat acaccagtga ggtagttccg      1320
     gctaacttgc ttcaagccca aagagactat ttcggagccc acacctacga gcttctcgcc      1380
     aagccaggta catgggtaca caccaactgg actggaactg gtggacgtgt cacctcaaat      1440
     gcttacaatg cataa                                                       1455
//
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