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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA93517; SV 1; linear; genomic DNA; STD; INV; 1452 BP.
XX
PA   Z69664.1
XX
DE   Caenorhabditis elegans C. elegans protein K04D7.3, confirmed by transcript
DE   evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1452
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="IV"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="K04D7"
FT   CDS             join(Z69664.1:11909..11948,Z69664.1:12405..12514,
FT                   Z69664.1:13199..13268,Z69664.1:13311..13408,
FT                   Z69664.1:13733..14071,Z69664.1:14119..14781,
FT                   Z69664.1:14867..14998)
FT                   /gene="gta-1"
FT                   /locus_tag="K04D7.3"
FT                   /standard_name="K04D7.3"
FT                   /product="C. elegans protein K04D7.3, confirmed by
FT                   transcript evidence"
FT                   /note="C. elegans GTA-1 protein; contains similarity to
FT                   Pfam domain PF00202 Aminotransferase class-III contains
FT                   similarity to Interpro domains IPR005814 (Aminotransferase
FT                   class-III), IPR004631 (4-aminobutyrate aminotransferase,
FT                   eukaryotic)"
FT                   /db_xref="GOA:Q21217"
FT                   /db_xref="InterPro:IPR004631"
FT                   /db_xref="InterPro:IPR005814"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="InterPro:IPR015424"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q21217"
FT                   /db_xref="WormBase:WBGene00001794"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA93517.1"
FT                   /translation="MLPRLAKSSLIQQVRGVSAIANAEPSGPSISTSIPGPKSKALKQE
FT                   MDKVHQTTSVRFHVDYEKSFGNYVVDADGNALLDVYTQISSLPLGYNHPDLVKVASQPH
FT                   LITSLVSRPALGSFPRTDFADGISHALTSIAPKGLKAVQTMLCGTSANENAIKTAFIWY
FT                   QAQRRGGLGPDALHLESCMNQQKPGTPNLSVMGFEGAFHGRSLCMLSVTRSKPIHKVDI
FT                   PAFDWPIAKFPRYKYPLDQNVAYNKKQDQECLADVEAKISEWKRRDNDVAAIIVEPIQA
FT                   EGGDHYGSPAFFQGLRDITSKHGIVFIVDEVQTGGGATGDIWAHDHWNLSSPPDMVTFS
FT                   KKLLTGGYFYGEHLRVKEAYRIYNTWMGDPTKLLLLEKAVEVIKRDGLIEQSREVGAEF
FT                   QKRLGELQASSGGKLDQARGRGTFAAVDFPSGSLRDKFVDLAISNGLHCGGCGDRSLRF
FT                   RPSLVYTKKHLDLTFDLLDKTLKGL"
XX
SQ   Sequence 1452 BP; 417 A; 299 C; 331 G; 405 T; 0 other; 710482365 CRC32;
     atgcttccca gactggcaaa gtcatcttta atccaacagg tgcgtggagt ttcggcgatt        60
     gcaaatgccg agccatctgg acctagtatt tcaacgagca ttcctggacc aaagtcaaag       120
     gcgttgaaac aggaaatgga taaagttcat caaactacat ccgttcgttt ccatgtcgac       180
     tacgagaaat cattcggaaa ttacgttgta gatgctgatg gaaatgcact tctcgatgtc       240
     tatactcaaa tatcatctct tcctttggga tacaatcatc cagatttggt taaggtcgct       300
     tcgcagccac atttgattac atctcttgtt tctcgtccag ctcttggatc cttcccacgt       360
     accgactttg ctgatggaat ttctcatgct cttacatcaa ttgctccaaa aggattgaag       420
     gcagttcaaa caatgctttg cggtacatcg gccaacgaga atgcaatcaa aactgcattt       480
     atctggtatc aagctcagag aagaggaggt cttggaccag atgctcttca tttggaaagc       540
     tgcatgaatc aacagaaacc aggaactcca aatctttcag ttatgggatt tgaaggagct       600
     ttccatggaa gatctttgtg catgttgtcg gttaccagaa gtaagccaat tcataaggtt       660
     gatattccag catttgactg gccaattgcc aagttccccc gttataagta tccacttgac       720
     cagaatgttg catacaataa gaagcaagat caggagtgtc ttgctgacgt tgaagcgaag       780
     atttccgaat ggaaacgtcg tgataatgat gtagctgcaa ttattgttga accaattcaa       840
     gcagaaggtg gagatcatta tggaagtcca gcattcttcc aaggcctccg tgatattact       900
     tctaaacatg gaattgtatt cattgttgat gaagttcaaa ctggaggtgg agcaactgga       960
     gatatctggg ctcatgatca ctggaacttg agctctccac cagatatggt cacattctca      1020
     aagaaacttt tgacaggagg atacttctac ggagaacatc tccgagttaa ggaggcttac      1080
     cgtatttaca acacatggat gggagatccg accaagcttc ttcttttgga aaaggctgtt      1140
     gaggttatta agagagatgg attgattgag cagagcagag aagttggagc tgaattccaa      1200
     aagagacttg gagaacttca agcatcgtct ggaggaaagt tggatcaagc cagaggaaga      1260
     ggaacttttg ccgccgttga cttcccatct ggatctttga gagacaaatt tgttgacttg      1320
     gccatcagca acggacttca ctgtggagga tgtggagacc gttcacttcg tttccgtcca      1380
     tcactcgtct acaccaaaaa acatttggat ctgactttcg atcttctcga caagactttg      1440
     aagggattgt aa                                                          1452
//
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