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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA93106; SV 2; linear; genomic DNA; STD; INV; 1707 BP.
XX
PA   Z68882.1
XX
DE   Caenorhabditis elegans C. elegans protein C47E12.3, partially confirmed by
DE   transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1707
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="IV"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="C47E12"
FT   CDS             complement(join(Z68882.1:30369..30581,
FT                   Z68882.1:30637..31062,Z68882.1:31107..31381,
FT                   Z68882.1:31434..31886,Z68882.1:32404..32483,
FT                   Z68882.1:32527..32663,Z68882.1:32706..32825,
FT                   Z68882.1:32874..32876))
FT                   /locus_tag="C47E12.3"
FT                   /standard_name="C47E12.3"
FT                   /product="C. elegans protein C47E12.3, partially confirmed
FT                   by transcript evidence"
FT                   /note="contains similarity to Pfam domain PF01532 Glycosyl
FT                   hydrolase family 47 contains similarity to Interpro domain
FT                   IPR001382 (Glycoside hydrolase, family 47)"
FT                   /db_xref="GOA:Q18679"
FT                   /db_xref="HSSP:1DL2"
FT                   /db_xref="InterPro:IPR001382"
FT                   /db_xref="UniProtKB/TrEMBL:Q18679"
FT                   /db_xref="WormBase:WBGene00008148"
FT                   /protein_id="CAA93106.2"
FT                   /translation="MKFVKNVLIFIALFSTTCSLKTTKNPFLLTKEEIKYASISDVDLQ
FT                   YGLAKTREMFQFGWDNYMEHAFPADELDPIHCRGRGHDHDNPDNINVNDVLGDYSLGLI
FT                   DTLDSLVVFGDADEFKRAVNLVIKTVSFEKNTTVQVFESTIRVMGGLLAAHMIAADKTN
FT                   RFGPFYMSDYGGELLTLAHDLAGRLLPAFDGTATGIPYTRINLQKGILPGTTNSTCTSG
FT                   AGSLLLEFGVLSKLLGDDTYERLARRVNEKLWNLRNEVTGLHGNLIDIQTGEWLGHLAG
FT                   LGAGIDSFYEYMLKSYILFGNQRDLDMYNESFARITTYMRRGRSRCSSLEGDIPIYVNV
FT                   DSRDGSTSNTWIDSLQASFAGVLVLAGEVDEAVCHHALYYAIWKKYGVLPERFNWQLQA
FT                   PDVSFYPLRPEFVESTYLLYTATKNPFYQHVGLEILDSLETITRVKCGFATVHDVIDGS
FT                   LEDRMESFFLSETLKYLYLLFDVDHPINKEQQESVLFSTEGHIFPISPLFNLPPTPPSQ
FT                   YDPPLKPLPRTNSSFCETATDFTFGTPPLRHSQMRELFKVIGVDSVLHDWL"
XX
SQ   Sequence 1707 BP; 498 A; 323 C; 350 G; 536 T; 0 other; 1452986242 CRC32;
     atgaaatttg tcaaaaatgt gttaattttc atcgcattgt tctctacgac gtgctcactc        60
     aaaacaacga aaaatccatt tcttttaacg aaggaggaaa taaaatatgc gtcaatttca       120
     gatgtggatt tgcaatatgg attggcaaaa acacgcgaaa tgtttcaatt tggatgggat       180
     aactacatgg aacatgcatt tccagcagat gaattagatc caattcattg tagaggccgt       240
     ggacacgatc atgataatcc agataatatt aatgttaacg atgtgcttgg agattactcg       300
     ttgggattaa ttgacacttt ggattcgctt gtggtttttg gagacgcaga cgaattcaaa       360
     cgagctgtta atcttgtaat taaaacagta tcgtttgaaa agaatacaac agttcaagta       420
     ttcgaatcaa ctattcgagt gatgggtggt cttctggctg ctcatatgat tgctgccgat       480
     aaaactaatc gatttggtcc tttctatatg tcagactacg gtggagaact tttaacactt       540
     gcccatgatt tagctgggcg acttttacca gcgttcgatg gaacggccac cggaattcct       600
     tacacccgta taaacttgca aaagggaatt cttccgggaa cgacaaactc tacatgtaca       660
     tcaggcgcgg ggagtctatt gcttgaattt ggtgtattgt caaagctgct tggagatgac       720
     acctatgaac gacttgctcg acgagttaat gaaaagttgt ggaatttaag aaatgaggtc       780
     actggattgc atggaaactt aattgacatt caaactggag aatggcttgg tcacttagca       840
     ggcctcggtg ctggaattga ttcattctat gaatatatgc taaagtcgta catccttttt       900
     ggtaatcaac gagatttaga tatgtataat gaatcatttg ctcgtatcac aacatacatg       960
     cgtcgaggtc gttctaggtg ttccagtctt gaaggtgata ttccaattta tgtaaatgtt      1020
     gattcaagag atggaagcac ttcaaataca tggatcgatt ctcttcaggc aagtttcgca      1080
     ggagttctgg ttttggctgg tgaagtcgac gaggctgtgt gccatcatgc cctttactat      1140
     gcaatttgga agaaatacgg agttctaccc gaacgattca attggcagtt acaagctcct      1200
     gatgtctcat tttatccact tcgtccagaa tttgttgaat ctacatatct attgtacact      1260
     gctacgaaaa atccatttta tcagcatgtt ggactggaaa ttcttgattc attagaaaca      1320
     attactcgag taaaatgtgg cttcgcaact gtgcatgatg tcattgatgg aagtcttgaa      1380
     gatcgaatgg aatcgttttt cttatcagaa acattaaagt atttatactt gttgttcgat      1440
     gtagatcatc caattaacaa ggaacagcaa gaaagtgttc ttttttcaac agagggtcac      1500
     atatttccaa tatccccgct gttcaatctg cctcctactc cgccatctca atatgatcca      1560
     cctctcaaac cattgccacg taccaactca tcattttgcg aaactgccac agacttcact      1620
     tttggaaccc caccacttcg tcattctcaa atgcgtgaat tgttcaaagt tattggagtt      1680
     gattcggttc ttcacgattg gttataa                                          1707
//
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