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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA91997; SV 4; linear; genomic DNA; STD; INV; 1896 BP.
XX
PA   Z68006.1
XX
DE   Caenorhabditis elegans C. elegans protein K09C8.4, partially confirmed by
DE   transcript evidence
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
OX   NCBI_TaxID=6239;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1896
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="X"
FT                   /strain="Bristol N2"
FT                   /mol_type="genomic DNA"
FT                   /clone="K09C8"
FT   CDS             join(Z68006.1:17257..17311,Z68006.1:17360..17421,
FT                   Z68006.1:17486..17794,Z68006.1:17838..17996,
FT                   Z68006.1:18611..18742,Z68006.1:19076..19525,
FT                   Z68006.1:19571..19760,Z68006.1:19806..19960,
FT                   Z68006.1:20007..20093,Z68006.1:20137..20264,
FT                   Z68006.1:20311..20479)
FT                   /gene="lge-1"
FT                   /locus_tag="K09C8.4"
FT                   /standard_name="K09C8.4"
FT                   /product="C. elegans protein K09C8.4, partially confirmed
FT                   by transcript evidence"
FT                   /note="C. elegans LGE-1 protein; contains similarity to
FT                   Pfam domain PF01501 Glycosyl transferase family 8 contains
FT                   similarity to Interpro domain IPR002495 (Glycosyl
FT                   transferase, family 8)"
FT                   /db_xref="GOA:Q21389"
FT                   /db_xref="InterPro:IPR002495"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q21389"
FT                   /db_xref="WormBase:WBGene00010716"
FT                   /protein_id="CAA91997.4"
FT                   /translation="MQSNYSISYFLLILFTGTSSYFTIWNFVDHTRVGAFPEEDYIRLA
FT                   YIIGGNFMTRLMFMQHFKSVLKYSDHFFRLHLITDENHRSDIHELMTSWNISNCEWFFH
FT                   NLTEFEKRVAWIPNSHYSKYYGLSKLLIPEIIGNDIGKIMFMDVDIIFQTNIFDLWKQF
FT                   RNFNNSQVFGMVENLSDWYLNKDGKKSVWPALGRGFNTGIIMFDLDKLRKNGWASKWRV
FT                   VANKYLRIHGKTAMSDQDIFNAYIHDYPTEIIQIPCAYNYQLGALTKSKELCPETPLAL
FT                   HFNSQNKTVGKNYAFFDKIRKAFDEMDGSDLKRRRRSFKGNNQKDICHEYLPLDNFRII
FT                   PNAIGRMTKPAELCMVTQFSKDRLNHFLESANAWRHPISTAVYGKDKDLLDIAKAVTEL
FT                   NRTDITIHLVFEEPTESWMLDSLYPINFLRNVAIEHANCKYILMTDVDFVVLGDYGTII
FT                   DQTGNLKQKEVLVIPALEMTYPQLRLNLSNFLSRKDLVIEHLLNKTIQTFRETIWPSSH
FT                   VPTNISKWIKSNRTYMVNYEKNYEPYFVIKKEECPFYDQRFGGFGWNKVTHVMQLKMMN
FT                   YKFLVSPTSFMIHQNHNASKSLKRWRRDPHYQKCLHTLKNKFMKKTASRLGIKLR"
XX
SQ   Sequence 1896 BP; 654 A; 330 C; 345 G; 567 T; 0 other; 2363082485 CRC32;
     atgcaatcaa actatagtat atcatatttt ctattaatcc tcttcacagg aacttcgtca        60
     tattttacaa tatggaactt tgtggaccac acacgtgttg gggcgtttcc ggaagaagat       120
     tacattcgcc ttgcgtatat tatcggtgga aattttatga cacgtcttat gttcatgcag       180
     cattttaaaa gtgtattgaa gtactctgac catttctttc gcctacatct gataactgat       240
     gaaaatcacc gatccgatat tcatgagctc atgacgtcat ggaatatttc aaactgcgag       300
     tggttttttc acaatctcac agagttcgaa aaacgagttg cttggattcc aaattcacat       360
     tattcaaaat attatggttt gagcaaactt ttaattcctg aaatcatcgg caatgacatt       420
     ggaaagatta tgttcatgga tgttgatatc atttttcaaa ccaatatttt tgatttgtgg       480
     aaacaattta gaaactttaa caattcccag gttttcggaa tggtggaaaa tctttccgat       540
     tggtatctta acaaggatgg taaaaagtcg gtttggccag cattgggacg tggatttaac       600
     actggaataa tcatgtttga tttggataag ctccggaaaa atggatgggc aagcaaatgg       660
     agagtagtgg ctaacaaata tttacgaatt cacggaaaaa ctgccatgtc agatcaagac       720
     atatttaatg catacattca tgactatccg actgaaatta tacaaattcc atgtgcttac       780
     aattatcaac ttggagcact cacaaaatcc aaagaactat gtccggagac tccacttgcg       840
     ctacatttca actcacaaaa caagactgtt ggaaaaaatt acgcattttt tgacaagatt       900
     cgaaaagcgt ttgatgaaat ggatggttca gatcttaaac gacgtagacg atcttttaaa       960
     ggaaataatc aaaaagatat ctgccatgaa tatttaccat tagacaattt ccgaattatc      1020
     ccaaatgcaa ttggaagaat gacaaaacct gcagaactct gcatggtgac gcagttttcc      1080
     aaagatcgac ttaatcattt tctggaaagt gcaaatgcgt ggcggcatcc tatatctaca      1140
     gcagtatacg ggaaggataa agatttgcta gacattgcaa aagccgtcac agaattgaat      1200
     cgcacagata tcacaatcca tctggttttt gaggaaccaa ctgaatcctg gatgctagac      1260
     tctttatatc ccataaattt tttgagaaat gtagcaattg aacacgcaaa ctgcaaatat      1320
     attttaatga ctgatgtaga ttttgtggta cttggagatt acggtacaat aatcgatcaa      1380
     actggaaacc tgaaacaaaa agaagttctg gtgatccctg cattggaaat gacatacccg      1440
     cagctgaggt taaatttatc aaattttctc tcgagaaaag atttggtgat agaacattta      1500
     ttgaacaaaa ccattcaaac ttttcgggaa acaatttggc caagttctca cgtacctaca      1560
     aatatttcaa aatggataaa gtcaaatcgc acttatatgg taaattatga aaagaactat      1620
     gaaccttatt ttgtaatcaa aaaagaagaa tgcccttttt acgatcagcg gttcggagga      1680
     tttggctgga ataaagtaac tcatgtaatg caactgaaaa tgatgaatta taagttcttg      1740
     gtttctccaa ctagttttat gattcatcaa aatcataatg cttcaaaatc attgaaacgc      1800
     tggagacgtg acccacatta tcagaaatgc cttcacacgt taaaaaataa atttatgaaa      1860
     aaaactgcta gtcgactggg aatcaagcta agatga                                1896
//
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