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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CAA89208; SV 1; linear; genomic DNA; STD; PRO; 960 BP.
XX
PA   Z49241.1
XX
DE   Prevotella ruminicola exo-beta-(1,4)-xylanase/beta-(1,4)-xylosidase
XX
OS   Prevotella ruminicola
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae;
OC   Prevotella.
OX   NCBI_TaxID=839;
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..960
FT                   /organism="Prevotella ruminicola"
FT                   /strain="B14"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="subclone in pUC18 derived from lambda EMBL3
FT                   clone 5"
FT                   /clone="5/4a"
FT                   /germline
FT   CDS             Z49241.1:1334..2293
FT                   /transl_table=11
FT                   /gene="xynB"
FT                   /product="exo-beta-(1,4)-xylanase/beta-(1,4)-xylosidase"
FT                   /function="xylan hydrolysis"
FT                   /note="belongs to a newly identified family of glycoside
FT                   hydrolases that also includes Bacteroides ovatus xsa (67.8%
FT                   identical amino acids) and C.stercorarium xylA (30.7%
FT                   identical amino acids). "
FT                   /db_xref="GOA:P48791"
FT                   /db_xref="InterPro:IPR006710"
FT                   /db_xref="UniProtKB/Swiss-Prot:P48791"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAA89208.1"
FT                   /translation="MKAKYVFPSDYMADPAANVFDGKLYIYPSHDYDSGECFDDDGGHF
FT                   QMKDYHVLCIDGDPMEQDAKDCGKQFGIEDIPWVEKQLWDNDCVEKDGKYYLIYSAKDY
FT                   TGVFHLGVAVADKPEGPFVPEADPIRGSYSIDPCVFKDDDGEIYVYFGGIWGGQLQWYK
FT                   DNKMLKAEHLPEGKEDPLPSRVARMTGDVKQFAEAPRAVIIVDETGKPLPADDPHRFFE
FT                   ASWMHKYNGKYYFSYSTGDTHLLCYAVGDNPYGPFTYQGVILEPVVGWTTHHSIVEYKG
FT                   KWYLFHHDCVPSNDTTWLRSLKVAELEYDAEGHIKTVK"
XX
SQ   Sequence 960 BP; 263 A; 165 C; 237 G; 295 T; 0 other; 802381598 CRC32;
     atgaaggcaa aatacgtgtt tccaagtgat tatatggcag accctgctgc caacgtgttt        60
     gatggtaaac tctatatcta tcctagtcac gactatgata gtggtgagtg ttttgatgat       120
     gatggtggtc atttccagat gaaagactat catgtactct gtattgatgg tgatccaatg       180
     gaacaggatg ccaaggactg tggtaaacag tttggtatcg aggatatccc atgggtagag       240
     aagcagttgt gggataacga ctgtgtagag aaggatggta aatactatct tatctatagt       300
     gccaaggatt ataccggtgt gtttcatctt ggtgtagcag tagccgataa acctgaggga       360
     ccatttgtgc cagaagcaga tcctattcgt ggttcgtata gtatcgaccc atgcgttttc       420
     aaggatgatg atggtgaaat ttatgtgtat tttggtggta tctggggtgg tcagctccaa       480
     tggtacaagg ataataagat gctaaaggct gaacacttgc ctgagggtaa ggaagatcca       540
     cttccttcta gagttgctcg tatgaccggt gatgttaagc agtttgctga ggctccacgt       600
     gctgtcatta tcgtagacga gacaggtaaa cctttaccag cagacgatcc tcaccgtttc       660
     ttcgaggctt catggatgca caaatataat ggaaagtatt attttagtta tagtactgga       720
     gatacacatt tactctgcta cgctgtaggc gataatcctt atggtccatt tacttaccag       780
     ggtgttattc ttgaaccagt tgtaggttgg actactcatc attctattgt agaatataaa       840
     ggcaagtggt atcttttcca tcacgactgt gtaccttcta atgacactac ttggttacgt       900
     tctttgaagg tagctgagtt ggaatatgac gctgaaggtc atatcaagac agtaaaataa       960
//
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